RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ADAMTS20P59510 1910 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 FAM231BA6NCW3 169 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 CD5LO43866 347 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 FXYD7P58549 80 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 RNFT1Q5M7Z0 435 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 Q6ZT83 130 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 SRSF12Q8WXF0 261 aaKnown RBP9.27□□□□□ -0.93
TRUB1-201ENST00000298746 PERPQ96FX8 193 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 FER1L6-AS2Q96M78 137 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 A6NDN8 102 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 SRRM5B3KS81 715 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 CCL11P51671 97 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 RBPMS2Q6ZRY4 209 aaKnown RBP9.27□□□□□ -0.93
TRUB1-201ENST00000298746 TEX45Q8NA69 505 aa9.27□□□□□ -0.93
TRUB1-201ENST00000298746 IGHV3-72A0A0B4J1Y9 119 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 LYZP61626 148 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 AARDQ4LEZ3 155 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 TMEM97Q5BJF2 176 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 ATP5L2Q7Z4Y8 100 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 CHCHD1Q96BP2 118 aaKnown RBP9.26□□□□□ -0.93
TRUB1-201ENST00000298746 SPTA1P02549 2419 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 TMEM265A0A087WTH1 108 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 A0A1W2PRD5 423 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 A0A1W2PRF3 423 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 A0A1W2PRM7 423 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 C21orf140B9A014 251 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 KLF5Q13887 457 aaPredicted RBP9.26□□□□□ -0.93
TRUB1-201ENST00000298746 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 BHLHA15Q7RTS1 189 aaPredicted RBP9.26□□□□□ -0.93
TRUB1-201ENST00000298746 WIPF2Q8TF74 440 aaPredicted RBP9.26□□□□□ -0.93
TRUB1-201ENST00000298746 CSTL1Q9H114 145 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 THYN1Q9P016 225 aa9.26□□□□□ -0.93
TRUB1-201ENST00000298746 CT45A6P0DMU7 189 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 CT45A5P0DMU8 189 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 CT45A7P0DMV0 189 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 PET117Q6UWS5 81 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 WFDC3Q8IUB2 231 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 CIARTQ8N365 385 aaPredicted RBP9.25□□□□□ -0.93
TRUB1-201ENST00000298746 FAM167A-AS1Q96KT0 104 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 MRPL20Q9BYC9 149 aaKnown RBP9.25□□□□□ -0.93
TRUB1-201ENST00000298746 SLC25A17O43808 307 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 PPBPP02775 128 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 PLP1P60201 277 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 FAM231DQ6ZW35 169 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 ZNF257Q9Y2Q1 563 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 F2RL2O00254 374 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 OR2J3O76001 311 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 CACNG8Q8WXS5 425 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 SARAFQ96BY9 339 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 COL6A3P12111 3177 aa9.25□□□□□ -0.93
TRUB1-201ENST00000298746 VWC2LB2RUY7 222 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 C9orf172C9J069 976 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 FAM87AP0C7U9 286 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 GUSBP1Q15486 140 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 SPRNQ5BIV9 151 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 STXBP6Q8NFX7 210 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 OR10AG1Q8NH19 301 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 DDB2Q92466 427 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 NBASA2RRP1 2371 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 TNFAIP6P98066 277 aaPredicted RBP9.24□□□□□ -0.93
TRUB1-201ENST00000298746 FAM90A1Q86YD7 464 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 WDFY4Q6ZS81 3184 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 TCRBV4S1A1TA0A5B7 111 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 FER1L6-AS1Q8NA97 138 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 GUCD1Q96NT3 240 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 Q9H3A6 140 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 RNF7Q9UBF6 113 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 PROCRQ9UNN8 238 aa9.24□□□□□ -0.93
TRUB1-201ENST00000298746 RBP4P02753 201 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 TMEM11P17152 192 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 RHOGP84095 191 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 C17orf58Q2M2W7 97 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 FAM71F2Q6NXP2 309 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 LINC00322Q6ZN03 302 aaPredicted RBP9.23□□□□□ -0.93
TRUB1-201ENST00000298746 TDHQ8IZJ6 230 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 C5orf17Q8NAS9 161 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 OR2K2Q8NGT1 345 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 ABCA4P78363 2273 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 FNDC10F2Z333 226 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 CCL8P80075 99 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 RIGQ13278 110 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
TRUB1-201ENST00000298746 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 MBD6Q96DN6 1003 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 URB1-AS1Q96HZ7 61 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 MS4A6AQ9H2W1 248 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 DSCAMO60469 2012 aa9.23□□□□□ -0.93
TRUB1-201ENST00000298746 A0A1B0GUT8 65 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 CT45A10P0DMU9 189 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 CCL3L1P16619 93 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 PLGLAQ15195 96 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 PATE2Q6UY27 113 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 FXYD5Q96DB9 178 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 A1L4Q6 167 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 GCSHP23434 173 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 ACP1P24666 158 aa9.22□□□□□ -0.93
TRUB1-201ENST00000298746 EXOC3-AS1Q8N2X6 119 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms