RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TMEM68Q96MH6 324 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 BPESC1Q9GZL8 116 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 GGTLC3B5MD39 225 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 IL4P05112 153 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 PMCHP20382 165 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 CEACAM3P40198 252 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 LY6EQ16553 131 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 PYY3Q5JQD4 70 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 IBA57Q5T440 356 aaKnown RBP7.46□□□□□ -1.22
PRDM9-201ENST00000296682 IGFL4Q6B9Z1 124 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 TEX38Q6PEX7 206 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 TMEM219Q86XT9 240 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 OR1L4Q8NGR5 311 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 SRD5A3Q9H8P0 318 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 INS-IGF2F8WCM5 200 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 H0Y8G0 127 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 NBEAP1P0C6P0 100 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PSG1P11464 419 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 BRD3OSQ6XYD6 125 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 SSX8Q7RTT4 187 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 TMEM256Q8N2U0 113 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 EXOC3-AS1Q8N2X6 119 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 CGB1A6NKQ9 187 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 MFAP2P55001 183 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRR20EP86478 221 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRR20CP86479 221 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRR20DP86480 221 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRR20BP86481 221 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRR20AP86496 221 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 RPEL1Q2QD12 228 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 C8orf31Q8N9H6 132 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 NRGNQ92686 78 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PYGO2Q9BRQ0 406 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 PRB1P04280 392 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 HIST1H1BP16401 226 aaKnown RBP7.45□□□□□ -1.22
PRDM9-201ENST00000296682 ETFRF1Q6IPR1 90 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 VMO1Q7Z5L0 202 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 C11orf42Q8N5U0 333 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 MAPK1IP1LQ8NDC0 245 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 OR2D3Q8NGH3 330 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 ZNF331Q9NQX6 463 aaPredicted RBP7.45□□□□□ -1.22
PRDM9-201ENST00000296682 GSN-AS1Q9NRJ2 163 aa7.45□□□□□ -1.22
PRDM9-201ENST00000296682 A0A1W2PPR1 153 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 TCRBV4S1A1TA0A5B7 111 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 ISLRO14498 428 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 PERPQ96FX8 193 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 OR2T8A6NH00 312 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 C19orf84I3L1E1 186 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 K7EN84 100 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 GATCO43716 136 aaKnown RBP7.44□□□□□ -1.22
PRDM9-201ENST00000296682 AMY1AP04745 511 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 CRISP2P16562 243 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 DNLZQ5SXM8 178 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 LDLRAD2Q5SZI1 272 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 PVRIGQ6DKI7 326 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 GOLT1AQ6ZVE7 132 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 OR1P1Q8NH06 330 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 CACNG8Q8WXS5 425 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 SSBP4Q9BWG4 385 aaPredicted RBP7.44□□□□□ -1.22
PRDM9-201ENST00000296682 PITPNC1Q9UKF7 332 aa7.44□□□□□ -1.22
PRDM9-201ENST00000296682 RPL11P62913 178 aaKnown RBP7.43□□□□□ -1.22
PRDM9-201ENST00000296682 ST6GALNAC6Q969X2 333 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 MRPL18Q9H0U6 180 aaKnown RBP7.43□□□□□ -1.22
PRDM9-201ENST00000296682 HIGD1AQ9Y241 93 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 TRBV24-1A0A075B6N3 115 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 J3KRW8 73 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 UTP20O75691 2785 aaKnown RBP7.43□□□□□ -1.22
PRDM9-201ENST00000296682 IGLV2-23P01705 113 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 IGHV2-70P01814 119 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 SMIM6P0DI80 62 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 ZFP36P26651 326 aaKnown RBP7.43□□□□□ -1.22
PRDM9-201ENST00000296682 KRTDAPP60985 99 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 PATE2Q6UY27 113 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 IGLC7A0M8Q6 106 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 NBR2O15453 112 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 VENTXO95231 258 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 GZMBP10144 247 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 CX3CL1P78423 397 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 RPL19P84098 196 aaKnown RBP7.43□□□□□ -1.22
PRDM9-201ENST00000296682 TPTE2P1Q5T6R2 138 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 ZNF841Q6ZN19 808 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 HIST3H2BBQ8N257 126 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 FAM168AQ92567 244 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 HIST1H2BLQ99880 126 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 KAAG1Q9UBP8 84 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 MTORP42345 2549 aa7.43□□□□□ -1.22
PRDM9-201ENST00000296682 CFAP46Q8IYW2 2715 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 ZNF253O75346 499 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 ADMP35318 185 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 BATFQ16520 125 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 UNQ5815/PRO19632Q6UWF5 114 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 ACANP16112 2415 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 IFITM10A6NMD0 228 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 PRSS47A8MTI9 375 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 CORTO00230 105 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 CSN3P07498 182 aa7.42□□□□□ -1.22
PRDM9-201ENST00000296682 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
PRDM9-201ENST00000296682 SELENOTP62341 195 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms