RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TPSG1Q9NRR2 321 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 IGHG3P01860 377 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 FAM27E3Q08E93 113 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 WFDC8Q8IUA0 241 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 ZNF714Q96N38 554 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 MAP1LC3CQ9BXW4 147 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 VWC2LB2RUY7 222 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 H0YJW9 148 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
CCNF-201ENST00000293968 C2orf70A6NJV1 201 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 OR4C13Q8NGP0 309 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 DSCAMO60469 2012 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 A0A1W2PRD5 423 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 A0A1W2PRF3 423 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 A0A1W2PRM7 423 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 IGLC7A0M8Q6 106 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 SYS1-DBNDD2H3BUS1 97 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 LHBP01229 141 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 MUC21Q5SSG8 566 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 LINC00322Q6ZN03 302 aaPredicted RBP11.87□□□□□ -0.51
CCNF-201ENST00000293968 CIARTQ8N365 385 aaPredicted RBP11.87□□□□□ -0.51
CCNF-201ENST00000293968 IGHV1-24A0A0C4DH33 117 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 VMA21Q3ZAQ7 101 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 RASL11AQ6T310 242 aa11.87□□□□□ -0.51
CCNF-201ENST00000293968 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 ITGB1BP1O14713 200 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 WT1P19544 449 aaPredicted RBP11.86□□□□□ -0.51
CCNF-201ENST00000293968 ZNF474Q6S9Z5 364 aaPredicted RBP11.86□□□□□ -0.51
CCNF-201ENST00000293968 GOLT1AQ6ZVE7 132 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 VSTM2AQ8TAG5 236 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 ZFHX4Q86UP3 3567 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 A0A087X0K7 114 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 OR2T8A6NH00 312 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 RBP4P02753 201 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 LDLRAD2Q5SZI1 272 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 FAM162BQ5T6X4 162 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 FAM231DQ6ZW35 169 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 WIPF2Q8TF74 440 aaPredicted RBP11.86□□□□□ -0.51
CCNF-201ENST00000293968 Q9H3A6 140 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 TECTAO75443 2155 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 CFHR2P36980 270 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 DLX1P56177 255 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 COTL1Q14019 142 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 MBD6Q96DN6 1003 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 ZNF883P0CG24 379 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 UQCRFS1P47985 274 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 PLGLAQ15195 96 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 MUC15Q8N387 334 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 PNKDQ8N490 385 aa11.86□□□□□ -0.51
CCNF-201ENST00000293968 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
CCNF-201ENST00000293968 ATP5IP56385 69 aaPredicted RBP11.85□□□□□ -0.51
CCNF-201ENST00000293968 ZNF788Q6ZQV5 615 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 ZC2HC1AQ96GY0 325 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 TMSB15BA0A087X1C1 80 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.85□□□□□ -0.51
CCNF-201ENST00000293968 LOC389332A0A1B0GUA5 103 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 S100A7P31151 101 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 GUSBP1Q15486 140 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 AMMECR1LQ6DCA0 310 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 EXOC3-AS1Q8N2X6 119 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 SPTBN2O15020 2390 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 PSG1P11464 419 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 KLF5Q13887 457 aaPredicted RBP11.85□□□□□ -0.51
CCNF-201ENST00000293968 STXBP6Q8NFX7 210 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 PRSS3P2Q8NHM4 247 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 GTSF1Q8WW33 167 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 TMUB1Q9BVT8 246 aa11.85□□□□□ -0.51
CCNF-201ENST00000293968 TIMM23BQ5SRD1 257 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 SRSF12Q8WXF0 261 aaKnown RBP11.84□□□□□ -0.51
CCNF-201ENST00000293968 DKK4Q9UBT3 224 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 LINC00312Q9Y6C7 94 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 PTPRBP23467 1997 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 TANC2Q9HCD6 1990 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 A0A1W2PPI3 338 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 RBPMS2Q6ZRY4 209 aaKnown RBP11.84□□□□□ -0.51
CCNF-201ENST00000293968 C5orf17Q8NAS9 161 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 OR4F17Q8NGA8 305 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 OR8A1Q8NGG7 326 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 RITA1Q96K30 269 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 AP1S3Q96PC3 154 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 BOD1L1Q8NFC6 3051 aa11.84□□□□□ -0.51
CCNF-201ENST00000293968 TM4SF5O14894 197 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 OR5AL1P0C617 328 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 RUSC1-AS1Q66K80 236 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 FA2HQ7L5A8 372 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 ATP5L2Q7Z4Y8 100 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 CACNA1HO95180 2353 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 LOC105371242A0A075B767 164 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 PSMB11A5LHX3 300 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 NDUFB3O43676 98 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 RBX1P62877 108 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 OR2J3O76001 311 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 TNFRSF1AP19438 455 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 URB1-AS1Q96HZ7 61 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 ST20Q9HBF5 79 aa11.83□□□□□ -0.52
CCNF-201ENST00000293968 IGKV1D-37A0A075B6S9 117 aa11.82□□□□□ -0.52
CCNF-201ENST00000293968 TCRAP04437 139 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms