RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 SUMO2P61956 95 aaKnown RBP9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 FAM215AQ9Y5M1 114 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 M0R381 172 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 RRN3P1Q2M238 152 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 SP5Q6BEB4 398 aaPredicted RBP9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 NBASA2RRP1 2371 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 OR9G4Q8NGQ1 327 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 TMEM190Q8WZ59 177 aa9.82□□□□□ -0.84
SYNGAP1-201ENST00000293748 MUC3AQ02505 3323 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 TLN1Q9Y490 2541 aaKnown RBP9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 FAM90A9PA6NNJ1 464 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 SRSF4Q08170 494 aaKnown RBP9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 LINC01559Q495D7 138 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 EPDR1Q9UM22 224 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 DPM2O94777 84 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 SUPT4H1P63272 117 aaKnown RBP9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 Q5PR19 223 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 TEX29Q8N6K0 151 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 C1orf162Q8NEQ5 155 aaPredicted RBP9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 TSKUQ8WUA8 353 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 ITLN2Q8WWU7 325 aaPredicted RBP9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 SSBP4Q9BWG4 385 aaPredicted RBP9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 TRAV8-2A0A0B4J237 113 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 C15orf61A6NNL5 157 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 UPK2O00526 184 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 YPEL1O60688 119 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 YPEL2Q96QA6 119 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 C21orf62Q9NYP8 219 aa9.81□□□□□ -0.84
SYNGAP1-201ENST00000293748 GATA2P23769 480 aaPredicted RBP9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 SNRPD3P62318 126 aaKnown RBP9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 SRSF7Q16629 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 SLC25A2Q9BXI2 301 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 A0A0A6YYD4 124 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 FABP5P3A8MUU1 101 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 EFNB3Q15768 340 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 ZNF585BQ52M93 769 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 ASCL2Q99929 193 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 USP24Q9UPU5 2620 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 CD55P08174 381 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 ADORA2A-AS1P86434 159 aa9.8□□□□□ -0.84
SYNGAP1-201ENST00000293748 ABCA1O95477 2261 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 IGKV1D-8A0A087WSZ0 117 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 C9JCJ5 164 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 H3BRM9 83 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 LEPP41159 167 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 PSG7Q13046 419 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 RASL11AQ6T310 242 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 LINC01551Q86U37 167 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 ZNF479Q96JC4 524 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 PLSCR4Q9NRQ2 329 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 DPM3Q9P2X0 92 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 RNF115Q9Y4L5 304 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 ATRXP46100 2492 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 LOC105371242A0A075B767 164 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 A6NNC1 897 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 IQCF6A8MYZ5 107 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 NPFFO15130 113 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 RNASE1P07998 156 aaKnown RBP9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 FBXL15Q9H469 300 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 IGHV3-35A0A0C4DH35 117 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 CECR9P0C854 216 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 CACNG7P62955 275 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 CD69Q07108 199 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 CLEC2AQ6UVW9 174 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 ZNF497Q6ZNH5 498 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 COQ2Q96H96 371 aa9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 FOXA2Q9Y261 457 aaPredicted RBP9.79□□□□□ -0.84
SYNGAP1-201ENST00000293748 ANAPC13Q9BS18 74 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 AGMATQ9BSE5 352 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 LINC00312Q9Y6C7 94 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 ZGRF1Q86YA3 2104 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 LYZL4Q96KX0 146 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 B9A039 149 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 NDUFA3O95167 84 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 FAM166AQ6J272 317 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 TCRBV4S1A1TA0A5B7 111 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 PVRIGQ6DKI7 326 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 OR5AN1Q8NGI8 311 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 ZNF837Q96EG3 531 aaPredicted RBP9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 MRPL20Q9BYC9 149 aaKnown RBP9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 VSIRQ9H7M9 311 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
SYNGAP1-201ENST00000293748 MUC21A0A0G2JKD1 596 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 MUC21A0A140T8X8 626 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 LINC01549A6NIU2 74 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 SAA1P0DJI8 122 aaPredicted RBP9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 ERVK11-1P61568 191 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 ACTL10Q5JWF8 245 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 MUC21Q5SSG8 566 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 SAMD5Q5TGI4 173 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 DCTN5Q9BTE1 182 aa9.77□□□□□ -0.84
SYNGAP1-201ENST00000293748 A8MWV9 139 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 RIPPLY3P57055 190 aa9.77□□□□□ -0.85
SYNGAP1-201ENST00000293748 PRCDQ00LT1 54 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 1093.2 ms