RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MPDU1O75352 247 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 IGKV1-39P01597 117 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 IGKV1D-39P04432 117 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 MFAP2P55001 183 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 IFITM2Q01629 132 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 PIP4P2Q8N4L2 257 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 TMEM86BQ8N661 226 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 EEF1AKMT3Q96AZ1 226 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNRD1Q9P1U0 126 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 FBXL17Q9UF56 701 aa6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 FOXA2Q9Y261 457 aaPredicted RBP6.76□□□□□ -1.33
PTPDC1-201ENST00000288976 RAMP3O60896 148 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 VENTXO95231 258 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 IGHV4-38-2P0DP08 117 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 MAS1LP35410 378 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 SPCS3P61009 180 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 BPIFA4PQ86YQ2 179 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 KLHL30-AS1Q8NEE0 82 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 FAM210BQ96KR6 192 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 PGPA6NDG6 321 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 S1PR2O95136 353 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 NDUFA3O95167 84 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 OR2C1O95371 312 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 IGLV2-23P01705 113 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 P01737 135 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 LDLRAD2Q5SZI1 272 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 LHFPL4Q7Z7J7 247 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 TCTE3Q8IZS6 198 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 TEX45Q8NA69 505 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 SNURFLB1AK76 121 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 KBTBD11O94819 623 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 AVPP01185 164 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 DIAPH2-AS1Q14236 149 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF705AQ6ZN79 300 aaPredicted RBP6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 STHQ8IWL8 128 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 ARL6IP6Q8N6S5 226 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 OR5AU1Q8NGC0 362 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 OR52E5Q8NH55 327 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 DUX3Q96PT4 197 aa6.75□□□□□ -1.33
PTPDC1-201ENST00000288976 MARCH11A6NNE9 402 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 TIMM23O14925 209 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 CRYGBP07316 175 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 FAM209BQ5JX69 171 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 OR11H7Q8NGC8 314 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 NOL4LQ96MY1 436 aaPredicted RBP6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 PAXXQ9BUH6 204 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 TSTD3H0UI37 97 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 PPP1R2P9O14990 202 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 PITX3O75364 302 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 RUNX1Q01196 453 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF56Q15929 161 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 VPS13CQ709C8 3753 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 LOC389332A0A1B0GUA5 103 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF324O75467 553 aaPredicted RBP6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 IGKV1-5P01602 117 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 FAM159AQ6UWV7 190 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 SCGB1D4Q6XE38 83 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF429Q86V71 674 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 OR4D5Q8NGN0 318 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 TMEM167AQ8TBQ9 72 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 PACRGQ96M98 296 aaPredicted RBP6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 TOMM7Q9P0U1 55 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 UNC79Q9P2D8 2635 aa6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
PTPDC1-201ENST00000288976 M0R381 172 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 TAAR5O14804 337 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 PRSS2P07478 247 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 CD99P14209 185 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 FAM120AOSQ5T036 256 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 RUSC1-AS1Q66K80 236 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 DYNAPQ8N1N2 210 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF257Q9Y2Q1 563 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 CXorf65A6NEN9 183 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 MFSD2BA6NFX1 497 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 AP4M1O00189 453 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 TGOLN2O43493 480 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 PAGE4O60829 102 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 DLX1P56177 255 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 IL15RAQ13261 267 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 ZNF502Q8TBZ5 544 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 SRSF8Q9BRL6 282 aaKnown RBP6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 AP5S1Q9NUS5 200 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 C21orf62Q9NYP8 219 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 C15orf61A6NNL5 157 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 INS-IGF2F8WCM5 200 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 M0QZK8 103 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 LYL1P12980 280 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 MIC13Q5XKP0 118 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 NEU1Q99519 415 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 TCF19Q9Y242 345 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 SOX21Q9Y651 276 aaPredicted RBP6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 CELSR2Q9HCU4 2923 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 NPIPB6E9PJ23 425 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 FGF16O43320 207 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 CD69Q07108 199 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 OR4A47Q6IF82 309 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 Q6YL49 198 aa6.73□□□□□ -1.33
PTPDC1-201ENST00000288976 SIGLECL1Q8N7X8 197 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms