RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 ARHGAP32A7KAX9 2087 aa14.74□□□□□ -0.05
PDLIM3-201ENST00000284767 PMCHL1Q16048 86 aa14.74□□□□□ -0.05
PDLIM3-201ENST00000284767 FAM122AQ96E09 287 aa14.74□□□□□ -0.05
PDLIM3-201ENST00000284767 OR1L8Q8NGR8 309 aa14.74□□□□□ -0.05
PDLIM3-201ENST00000284767 DLX6P56179 175 aa14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 FAM231DQ6ZW35 169 aa14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 MOB3BQ86TA1 216 aa14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 C18orf32Q8TCD1 76 aa14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 DNAJC4Q9NNZ3 241 aa14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 GATA2P23769 480 aaPredicted RBP14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 STPG4Q8N801 248 aa14.73□□□□□ -0.05
PDLIM3-201ENST00000284767 SLAQ13239 276 aa14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 TMEM155Q4W5P6 130 aa14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 FAM19A2Q8N3H0 131 aa14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 ZNF841Q6ZN19 808 aa14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 OR5B3Q8NH48 314 aa14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 MBD6Q96DN6 1003 aa14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 MRPS16Q9Y3D3 137 aaKnown RBP14.72□□□□□ -0.05
PDLIM3-201ENST00000284767 TEX50A0A1B0GTY4 177 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 CD69Q07108 199 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 ZNF833PQ6ZTB9 187 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 OR10X1Q8NGY0 326 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 ORAOV1Q8WV07 137 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 FAM167A-AS1Q96KT0 104 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 WNT10AQ9GZT5 417 aa14.71□□□□□ -0.05
PDLIM3-201ENST00000284767 C20orf202A1L168 122 aa14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 C19orf84I3L1E1 186 aa14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 NDUFB8O95169 186 aa14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 RNASE2P10153 161 aaKnown RBP14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 NTF3P20783 257 aa14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 UBE2L3P68036 154 aaKnown RBP14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 KLF5Q13887 457 aaPredicted RBP14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 OR9G1Q8NH87 305 aa14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 SLC25A2Q9BXI2 301 aa14.71□□□□□ -0.06
PDLIM3-201ENST00000284767 ZFYVE26Q68DK2 2539 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 PSMB11A5LHX3 300 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 TMEM30BQ3MIR4 351 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 CACNG8Q8WXS5 425 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 GRAMD2BQ96HH9 432 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 CHRDL1Q9BU40 450 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 BET1LQ9NYM9 111 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 CSMD1Q96PZ7 3565 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 CA1P00915 261 aaPredicted RBP14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 IGHV1-8P0DP01 117 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 ITLN2Q8WWU7 325 aaPredicted RBP14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 CLEC7AQ9BXN2 247 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 FLNCQ14315 2725 aa14.7□□□□□ -0.06
PDLIM3-201ENST00000284767 MED13LQ71F56 2210 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 CACNA1BQ00975 2339 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 TCF21O43680 179 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 TSPOP30536 169 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 FAM168AQ92567 244 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 HSBP1O75506 76 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 C11orf71Q6IPW1 123 aa14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 AMMECR1Q9Y4X0 333 aaPredicted RBP14.69□□□□□ -0.06
PDLIM3-201ENST00000284767 NDUFS7O75251 213 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 NHLRC2Q8NBF2 726 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 FAM181BA6NEQ2 426 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 H0YJW9 148 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 OR2J3O76001 311 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 SAA1P0DJI8 122 aaPredicted RBP14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 MFAP2P55001 183 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 TNXAQ16473 311 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 NUP35Q8NFH5 326 aa14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 SSBP3Q9BWW4 388 aaPredicted RBP14.68□□□□□ -0.06
PDLIM3-201ENST00000284767 TRAV9-2A0A087WT02 112 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 IGHV3-72A0A0B4J1Y9 119 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 MLANAQ16655 118 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 RAB1BQ9H0U4 201 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 ZNF355PQ9NSJ1 428 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 PLXNB1O43157 2135 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 IGHV2-26A0A0B4J1V2 119 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 OR8B3Q8NGG8 313 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 OR8B2Q96RD0 313 aa14.67□□□□□ -0.06
PDLIM3-201ENST00000284767 VPS13CQ709C8 3753 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 TRAV5A0A0B4J249 113 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 M0R2Z0 102 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 PEX7O00628 323 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 MORN5Q5VZ52 161 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 ATP5L2Q7Z4Y8 100 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 ZNF329Q86UD4 541 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 NUDT10Q8NFP7 164 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 OR1L4Q8NGR5 311 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 ST6GALNAC6Q969X2 333 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 NUDT11Q96G61 164 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 RITA1Q96K30 269 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 LINC00479Q96M42 142 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 HARBI1Q96MB7 349 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 USP24Q9UPU5 2620 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 INS-IGF2F8WCM5 200 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 GDF5OSQ5U4N7 250 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 OR5AN1Q8NGI8 311 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 ALKBH7Q9BT30 221 aaPredicted RBP14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 TMEM133Q9H2Q1 129 aa14.66□□□□□ -0.06
PDLIM3-201ENST00000284767 HIST1H1EP10412 219 aaKnown RBP14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 ERHP84090 104 aaKnown RBP14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 LCN12Q6JVE5 192 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 ATOH7Q8N100 152 aa14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 OSR1Q8TAX0 266 aaPredicted RBP14.65□□□□□ -0.06
PDLIM3-201ENST00000284767 PAXXQ9BUH6 204 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms