RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TOMM20LQ6UXN7 152 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 OR2T6Q8NHC8 308 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 PAXXQ9BUH6 204 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 SAP30LQ9HAJ7 183 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 GNB4Q9HAV0 340 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 DCAF16Q9NXF7 216 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF586Q9NXT0 402 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 ZNRD1Q9P1U0 126 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 KAAG1Q9UBP8 84 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF469Q96JG9 3925 aaPredicted RBP10.39□□□□□ -0.75
C9orf3-201ENST00000277198 IGLV2-23P01705 113 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 THBDP07204 575 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 WT1-ASQ06250 92 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 MIEN1Q9BRT3 115 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 SNHG12Q9BXW3 62 aa10.39□□□□□ -0.75
C9orf3-201ENST00000277198 DPRXA6NFQ7 191 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 MGST1P10620 155 aaKnown RBP10.38□□□□□ -0.75
C9orf3-201ENST00000277198 CCL3L1P16619 93 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 TGIF2LXQ8IUE1 241 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 ZCCHC24Q8N2G6 241 aaKnown RBP10.38□□□□□ -0.75
C9orf3-201ENST00000277198 TNFRSF14Q92956 283 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 KCNS1Q96KK3 526 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF331Q9NQX6 463 aaPredicted RBP10.38□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF355PQ9NSJ1 428 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 F8P00451 2351 aa10.38□□□□□ -0.75
C9orf3-201ENST00000277198 CGB1A6NKQ9 187 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 CRYGCP07315 174 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 PAX2Q02962 417 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 TMEM190Q8WZ59 177 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 NPIPB3Q92617 1050 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 MBD6Q96DN6 1003 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 NEU1Q99519 415 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 FNDC4Q9H6D8 234 aaPredicted RBP10.37□□□□□ -0.75
C9orf3-201ENST00000277198 CBLN4Q9NTU7 201 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 MRPL27Q9P0M9 148 aaKnown RBP10.37□□□□□ -0.75
C9orf3-201ENST00000277198 CADP27708 2225 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 IGKV1D-37A0A075B6S9 117 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 E7EUB6 86 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 PEX7O00628 323 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 EREGO14944 169 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 FSTL3O95633 263 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 FRMD6-AS1P0C7T7 363 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 MYCNOSP40205 109 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 FXYD3Q14802 87 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF329Q86UD4 541 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 TEX45Q8NA69 505 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 OR4B1Q8NGF8 309 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
C9orf3-201ENST00000277198 PRRC2AP48634 2157 aaKnown RBP10.37□□□□□ -0.75
C9orf3-201ENST00000277198 TRAV5A0A0B4J249 113 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 CORTO00230 105 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 BMPR1BO00238 502 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 TCAPO15273 167 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF253O75346 499 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 APCSP02743 223 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 HIST1H1EP10412 219 aaKnown RBP10.36□□□□□ -0.75
C9orf3-201ENST00000277198 COL8A2P25067 703 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 LOXP28300 417 aaPredicted RBP10.36□□□□□ -0.75
C9orf3-201ENST00000277198 DLX6P56179 175 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 BSPH1Q075Z2 132 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 TMEM155Q4W5P6 130 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 MORN5Q5VZ52 161 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 PATE2Q6UY27 113 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 ATP5L2Q7Z4Y8 100 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 WFDC8Q8IUA0 241 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 FXYD5Q96DB9 178 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 PERPQ96FX8 193 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 SERTAD4Q9NUC0 356 aa10.36□□□□□ -0.75
C9orf3-201ENST00000277198 FCN3O75636 299 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 C19orf35Q6ZS72 473 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 C22orf15Q8WYQ4 148 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 H1FXQ92522 213 aaKnown RBP10.35□□□□□ -0.75
C9orf3-201ENST00000277198 TRGV9Q99603 122 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 NGBQ9NPG2 151 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 KLF12Q9Y4X4 402 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 ITPR3Q14573 2671 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 DYSFO75923 2080 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 A0A1W2PS18 150 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 ZNF324O75467 553 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-201ENST00000277198 REG1BP48304 166 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 COMPP49747 757 aaPredicted RBP10.35□□□□□ -0.75
C9orf3-201ENST00000277198 VN1R17PQ8TDU5 208 aa10.35□□□□□ -0.75
C9orf3-201ENST00000277198 RBM14Q96PK6 669 aaKnown RBP10.35□□□□□ -0.75
C9orf3-201ENST00000277198 TBL2Q9Y4P3 447 aaKnown RBP10.35□□□□□ -0.75
C9orf3-201ENST00000277198 RAI1Q7Z5J4 1906 aaPredicted RBP10.34□□□□□ -0.75
C9orf3-201ENST00000277198 A0A1W2PPI3 338 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 F2Z2F3 143 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 PLAUP00749 431 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 SRIP30626 198 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 CDKN1AP38936 164 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 AMTP48728 403 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 TCL1AP56279 114 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 PLP1P60201 277 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 LINC00305Q7Z4B0 112 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 TMEM116Q8NCL8 245 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 TSKUQ8WUA8 353 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 CCL17Q92583 94 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 NRN1Q9NPD7 142 aa10.34□□□□□ -0.75
C9orf3-201ENST00000277198 TNFRSF19Q9NS68 423 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms