RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 TANC2Q9HCD6 1990 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 TMEM8BA6NDV4 472 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 EFNA2O43921 213 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 PIP4P1Q86T03 277 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 ZNF808Q8N4W9 903 aaPredicted RBP7.48□□□□□ -1.21
PDGFC-201ENST00000274071 SPTSSAQ969W0 71 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 RAB9BQ9NP90 201 aa7.48□□□□□ -1.21
PDGFC-201ENST00000274071 IGKV2D-26A0A0A0MRZ7 120 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 FAM106CPP0CH98 169 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 RRN3P1Q2M238 152 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 MBNL2Q5VZF2 373 aaKnown RBP7.47□□□□□ -1.21
PDGFC-201ENST00000274071 UBALD1Q8TB05 177 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 NGBQ9NPG2 151 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 TCF19Q9Y242 345 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 MRPS17Q9Y2R5 130 aaKnown RBP7.47□□□□□ -1.21
PDGFC-201ENST00000274071 USF3Q68DE3 2245 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 A0A096LNJ9 63 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.47□□□□□ -1.21
PDGFC-201ENST00000274071 PPDPFLQ8WWR9 84 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 ST8SIA1Q92185 356 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 PRO3102Q9H379 93 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 TRAV4A0A0B4J268 109 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 A0A1W2PR77 199 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 SMIM9A6NGZ8 99 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 PRSS46E5RG02 174 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 BRWD1-AS2P59051 145 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 RPL30P62888 115 aaKnown RBP7.47□□□□□ -1.21
PDGFC-201ENST00000274071 SRSF1Q07955 248 aaKnown RBP eCLIP7.47□□□□□ -1.21
PDGFC-201ENST00000274071 PLEKHA3Q9HB20 300 aa7.47□□□□□ -1.21
PDGFC-201ENST00000274071 FCN3O75636 299 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 IGKV3-11P04433 115 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 FGF12P61328 243 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 C3orf56Q8N813 242 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 RPEQ96AT9 228 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 PGLYRP4Q96LB8 373 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 SPANXA1Q9NS26 97 aa7.46□□□□□ -1.21
PDGFC-201ENST00000274071 SLC25A10Q9UBX3 287 aaPredicted RBP7.46□□□□□ -1.21
PDGFC-201ENST00000274071 HCFC1P51610 2035 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 ZNF688P0C7X2 276 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 MPV17P39210 176 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 LOXL1Q08397 574 aaPredicted RBP7.46□□□□□ -1.22
PDGFC-201ENST00000274071 DEFB133Q30KQ1 61 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 H2BFWTQ7Z2G1 175 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 NABP1Q96AH0 204 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 SPRY4Q9C004 299 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 DLL3Q9NYJ7 618 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 VPS13AQ96RL7 3174 aa7.46□□□□□ -1.22
PDGFC-201ENST00000274071 NPIPB11E5RHQ5 1161 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 CRLF1O75462 422 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 CRYGSP22914 178 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 CA6P23280 308 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 ACP1P24666 158 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 C1orf210Q8IVY1 113 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 CDX2Q99626 313 aaPredicted RBP7.45□□□□□ -1.22
PDGFC-201ENST00000274071 TMEM126AQ9H061 195 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 C7orf69Q9H7B7 122 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 WDR87Q6ZQQ6 2873 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 DMDP11532 3685 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 MED12Q93074 2177 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 TRBV6-6A0A0A6YYG2 114 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 A0A1W2PNR3 127 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 GLRXP35754 106 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 TMEM78Q5T7P6 136 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 PRSS3P2Q8NHM4 247 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 RASL10AQ92737 203 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 MMABQ96EY8 250 aaPredicted RBP7.45□□□□□ -1.22
PDGFC-201ENST00000274071 DKK2Q9UBU2 259 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 SOX21Q9Y651 276 aaPredicted RBP7.45□□□□□ -1.22
PDGFC-201ENST00000274071 EXPH5Q8NEV8 1989 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 RP1P56715 2156 aa7.45□□□□□ -1.22
PDGFC-201ENST00000274071 LOC107984640A0A0U1RRK4 108 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 C17orf98A8MV24 154 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 TMEM262E9PQX1 116 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 TGFAP01135 160 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 TEN1Q86WV5 123 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 FGFBP3Q8TAT2 258 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 ZNF414Q96IQ9 312 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 CABIN1Q9Y6J0 2220 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 SEC16AO15027 2179 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 IGHV5-51A0A0C4DH38 117 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 MYOD1P15172 320 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 EVI2AP22794 236 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 GFERP55789 205 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 PRR20EP86478 221 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 PRR20CP86479 221 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 PRR20DP86480 221 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 PRR20BP86481 221 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 PRR20AP86496 221 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 RPRMLQ8N4K4 120 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 RBMXL3Q8N7X1 1067 aaKnown RBP7.44□□□□□ -1.22
PDGFC-201ENST00000274071 FADS6Q8N9I5 356 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 FBXL15Q9H469 300 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 AMMECR1Q9Y4X0 333 aaPredicted RBP7.44□□□□□ -1.22
PDGFC-201ENST00000274071 FRYLO94915 3013 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 CEP192Q8TEP8 1941 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 TRAV24A0A0B4J272 114 aa7.44□□□□□ -1.22
PDGFC-201ENST00000274071 LILRA5A6NI73 299 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms