RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 SLC25A17O43808 307 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 FCN3O75636 299 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 MYCNOSP40205 109 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 FAM27E3Q08E93 113 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 OR10X1Q8NGY0 326 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 GTSF1Q8WW33 167 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 MBD3L4A6NDZ8 208 aaPredicted RBP22.11■■□□□ 1.13
CBX4-201ENST00000269397 MBD3L3A6NE82 208 aaPredicted RBP22.11■■□□□ 1.13
CBX4-201ENST00000269397 MBD3L5A6NJ08 208 aaPredicted RBP22.11■■□□□ 1.13
CBX4-201ENST00000269397 C22orf46C9J442 243 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 PRB4P10163 310 aaPredicted RBP22.11■■□□□ 1.13
CBX4-201ENST00000269397 DEFB109BQ30KR1 87 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 TMEM177Q53S58 311 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 MBD3L2Q8NHZ7 208 aaPredicted RBP22.11■■□□□ 1.13
CBX4-201ENST00000269397 TMEM70Q9BUB7 260 aa22.11■■□□□ 1.13
CBX4-201ENST00000269397 MCRIP2Q9BUT9 160 aaKnown RBP22.11■■□□□ 1.13
CBX4-201ENST00000269397 H1FXQ92522 213 aaKnown RBP22.1■■□□□ 1.13
CBX4-201ENST00000269397 OR4C46A6NHA9 309 aa22.1■■□□□ 1.13
CBX4-201ENST00000269397 HBBP68871 147 aa22.1■■□□□ 1.13
CBX4-201ENST00000269397 FAM120AOSQ5T036 256 aa22.1■■□□□ 1.13
CBX4-201ENST00000269397 SSUH2Q9Y2M2 353 aa22.1■■□□□ 1.13
CBX4-201ENST00000269397 IGHV3-72A0A0B4J1Y9 119 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 hDV102S1A0JD36 115 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 IGFL2Q6UWQ7 119 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 ZNF738Q8NE65 137 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 OR4C13Q8NGP0 309 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 TMEM167AQ8TBQ9 72 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 ASCL3Q9NQ33 180 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 A0A1W2PPI3 338 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 TMEM200BQ69YZ2 307 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 CHRDL1Q9BU40 450 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 GAL3ST2Q9H3Q3 398 aa22.09■■□□□ 1.13
CBX4-201ENST00000269397 IGLC7A0M8Q6 106 aa22.08■■□□□ 1.13
CBX4-201ENST00000269397 TNFSF4P23510 183 aa22.08■■□□□ 1.13
CBX4-201ENST00000269397 CA7P43166 264 aa22.08■■□□□ 1.13
CBX4-201ENST00000269397 ZNF138P52744 262 aa22.08■■□□□ 1.13
CBX4-201ENST00000269397 GPR82Q96P67 336 aa22.08■■□□□ 1.13
CBX4-201ENST00000269397 RPP21Q9H633 154 aaKnown RBP22.08■■□□□ 1.13
CBX4-201ENST00000269397 FAM215AQ9Y5M1 114 aa22.08■■□□□ 1.13
CBX4-201ENST00000269397 TOX4O94842 621 aa22.08■■□□□ 1.12
CBX4-201ENST00000269397 NBEAP1P0C6P0 100 aa22.08■■□□□ 1.12
CBX4-201ENST00000269397 UBE2V1Q13404 147 aa22.08■■□□□ 1.12
CBX4-201ENST00000269397 Q71RC1 249 aaPredicted RBP22.08■■□□□ 1.12
CBX4-201ENST00000269397 GSX1Q9H4S2 264 aaPredicted RBP22.08■■□□□ 1.12
CBX4-201ENST00000269397 FAM87AP0C7U9 286 aa22.07■■□□□ 1.12
CBX4-201ENST00000269397 SUB1P53999 127 aaKnown RBP eCLIP22.07■■□□□ 1.12
CBX4-201ENST00000269397 TIMM8BQ9Y5J9 83 aaPredicted RBP22.07■■□□□ 1.12
CBX4-201ENST00000269397 TACC2O95359 2948 aa22.07■■□□□ 1.12
CBX4-201ENST00000269397 IGHV1-24A0A0C4DH33 117 aa22.07■■□□□ 1.12
CBX4-201ENST00000269397 H0Y8G0 127 aa22.07■■□□□ 1.12
CBX4-201ENST00000269397 MUC15Q8N387 334 aa22.07■■□□□ 1.12
CBX4-201ENST00000269397 IGLV2-23P01705 113 aa22.06■■□□□ 1.12
CBX4-201ENST00000269397 ATP5L2Q7Z4Y8 100 aa22.06■■□□□ 1.12
CBX4-201ENST00000269397 THAP8Q8NA92 274 aa22.06■■□□□ 1.12
CBX4-201ENST00000269397 PCNX1Q96RV3 2341 aa22.06■■□□□ 1.12
CBX4-201ENST00000269397 TRAV8-1A0A0A6YYK1 113 aa22.06■■□□□ 1.12
CBX4-201ENST00000269397 NKX6-3A6NJ46 265 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 ENSAO43768 121 aaKnown RBP22.05■■□□□ 1.12
CBX4-201ENST00000269397 P01737 135 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 PERPQ96FX8 193 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 MLST8Q9BVC4 326 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 IGHV1-69-2A0A0G2JMI3 117 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 MPV17L2Q567V2 206 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 TEX36Q5VZQ5 186 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 ZNF835Q9Y2P0 537 aa22.05■■□□□ 1.12
CBX4-201ENST00000269397 TOMM40O96008 361 aa22.04■■□□□ 1.12
CBX4-201ENST00000269397 ZZEF1O43149 2961 aa22.04■■□□□ 1.12
CBX4-201ENST00000269397 CD40P25942 277 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 PRB3Q04118 309 aaPredicted RBP22.03■■□□□ 1.12
CBX4-201ENST00000269397 VSTM2AQ8TAG5 236 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 KLF12Q9Y4X4 402 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 A8MWL6 223 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 LOC105371242A0A075B767 164 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 INS-IGF2F8WCM5 200 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 SYS1-DBNDD2H3BUS1 97 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 LEPROTL1O95214 131 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 TMEM30BQ3MIR4 351 aa22.03■■□□□ 1.12
CBX4-201ENST00000269397 CACNA1HO95180 2353 aa22.02■■□□□ 1.12
CBX4-201ENST00000269397 DLX1P56177 255 aa22.02■■□□□ 1.12
CBX4-201ENST00000269397 LYPD2Q6UXB3 125 aa22.02■■□□□ 1.12
CBX4-201ENST00000269397 ASCL2Q99929 193 aa22.02■■□□□ 1.12
CBX4-201ENST00000269397 PRSS22Q9GZN4 317 aa22.02■■□□□ 1.12
CBX4-201ENST00000269397 TPRP12270 2363 aaKnown RBP22.02■■□□□ 1.12
CBX4-201ENST00000269397 Q9H3A6 140 aa22.02■■□□□ 1.11
CBX4-201ENST00000269397 FBLN7Q53RD9 439 aa22.01■■□□□ 1.11
CBX4-201ENST00000269397 DAZAP1Q96EP5 407 aaKnown RBP22.01■■□□□ 1.11
CBX4-201ENST00000269397 PMCHL2Q9BQD1 86 aa22.01■■□□□ 1.11
CBX4-201ENST00000269397 WASHC3Q9Y3C0 194 aa22.01■■□□□ 1.11
CBX4-201ENST00000269397 CIARTQ8N365 385 aaPredicted RBP22.01■■□□□ 1.11
CBX4-201ENST00000269397 CSN3P07498 182 aa22■■□□□ 1.11
CBX4-201ENST00000269397 RBX1P62877 108 aa22■■□□□ 1.11
CBX4-201ENST00000269397 CCL17Q92583 94 aa22■■□□□ 1.11
CBX4-201ENST00000269397 C19orf71A6NCJ1 209 aa22■■□□□ 1.11
CBX4-201ENST00000269397 TCRAP04437 139 aa22■■□□□ 1.11
CBX4-201ENST00000269397 MRGPRG-AS1Q2M3A8 158 aa22■■□□□ 1.11
CBX4-201ENST00000269397 STXBP6Q8NFX7 210 aa22■■□□□ 1.11
CBX4-201ENST00000269397 LTAP01374 205 aa21.99■■□□□ 1.11
CBX4-201ENST00000269397 CNTFRP26992 372 aa21.99■■□□□ 1.11
CBX4-201ENST00000269397 VAMP3Q15836 100 aa21.99■■□□□ 1.11
CBX4-201ENST00000269397 LOXL4Q96JB6 756 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms