RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 HEATR5BQ9P2D3 2071 aa10.45□□□□□ -0.74
CDH11-201ENST00000268603 LAMB2P55268 1798 aa10.45□□□□□ -0.74
CDH11-201ENST00000268603 PQLC2LA1A4F0 135 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 CD5P06127 495 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 CSTL1Q9H114 145 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 TRAV12-1A0A0B4J245 112 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 A0A0G2JK05 382 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 MLNRO43193 412 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 PRR31Q5SQ13 230 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 CHCHD1Q96BP2 118 aaKnown RBP10.44□□□□□ -0.74
CDH11-201ENST00000268603 RAMP1O60894 148 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 TRACP01848 142 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 IRF3Q14653 427 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
CDH11-201ENST00000268603 PILRAQ9UKJ1 303 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 C9JAW5 83 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 E9PLN8 166 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 TNFSF13O75888 250 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 SP5Q6BEB4 398 aaPredicted RBP10.44□□□□□ -0.74
CDH11-201ENST00000268603 LCN12Q6JVE5 192 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 XCL2Q9UBD3 114 aa10.44□□□□□ -0.74
CDH11-201ENST00000268603 PRB2P02812 416 aaPredicted RBP10.43□□□□□ -0.74
CDH11-201ENST00000268603 C20orf204Q6ZNR8 217 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 EPOPA6NHQ4 379 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 IQCF6A8MYZ5 107 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 NXPH4O95158 308 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 TDRD6O60522 2096 aaKnown RBP10.43□□□□□ -0.74
CDH11-201ENST00000268603 MPTX1A8MV57 137 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 SRP19P09132 144 aaKnown RBP10.43□□□□□ -0.74
CDH11-201ENST00000268603 RPL23P62829 140 aaKnown RBP10.43□□□□□ -0.74
CDH11-201ENST00000268603 UNQ6494/PRO21346Q6UXR6 183 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 CD160O95971 181 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 APOC4P55056 127 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 SYNJ2BPP57105 145 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 TIMM21Q9BVV7 248 aa10.43□□□□□ -0.74
CDH11-201ENST00000268603 IGKV1-8A0A0C4DH67 115 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 ZNF708P17019 499 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 H2BFSP57053 126 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 C1orf100Q5SVJ3 147 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 SMPXQ9UHP9 88 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 ZNF646O15015 1829 aaPredicted RBP10.42□□□□□ -0.74
CDH11-201ENST00000268603 DEFB131AP59861 70 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 FAM90A2PQ658T7 463 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 FAM90A1Q86YD7 464 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 SVIPQ8NHG7 77 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 Q96MF0 132 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 MBNL3Q9NUK0 354 aaKnown RBP10.42□□□□□ -0.74
CDH11-201ENST00000268603 VWC2Q2TAL6 325 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 KNCNA6PVL3 124 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 NEUROG3Q9Y4Z2 214 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 ZNF831Q5JPB2 1677 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 VCYO14598 125 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 C1QTNF9P0C862 333 aa10.42□□□□□ -0.74
CDH11-201ENST00000268603 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.41□□□□□ -0.74
CDH11-201ENST00000268603 IGKV1OR2-108A0A075B7D4 117 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 PMS2P5A8MQ11 134 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 UBL5Q9BZL1 73 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 OTOFQ9HC10 1997 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 TPTE2P1Q5T6R2 138 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 C14orf178Q8N769 122 aaPredicted RBP10.41□□□□□ -0.74
CDH11-201ENST00000268603 BAALCQ8WXS3 180 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 TRBV7-1A0A0A6YYK4 115 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 FAM90A9PA6NNJ1 464 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 IGFL4Q6B9Z1 124 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 CLPSL2Q6UWE3 100 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 TMEM170AQ8WVE7 144 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 MAP1BP46821 2468 aaKnown RBP10.41□□□□□ -0.74
CDH11-201ENST00000268603 IGHV2-26A0A0B4J1V2 119 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 PAX9P55771 341 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 RBM38Q9H0Z9 239 aaKnown RBP10.41□□□□□ -0.74
CDH11-201ENST00000268603 IGKV2D-24A0A075B6R9 120 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 RBM3P98179 157 aaKnown RBP10.41□□□□□ -0.74
CDH11-201ENST00000268603 MORN2Q502X0 79 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 DSCR8Q96T75 97 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 CHAC1Q9BUX1 264 aa10.41□□□□□ -0.74
CDH11-201ENST00000268603 TRBV25-1A0A075B6N4 114 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 C1QL4Q86Z23 238 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 EXOC3-AS1Q8N2X6 119 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 DEPPQ9NTK1 212 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 IGHMP01871 453 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 C4orf48Q5BLP8 95 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 Q9HAA7 133 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 CCL20P78556 96 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 TIMM17AQ99595 171 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 A0A1W2PRE2 83 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 GAGE12BA1L429 117 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 GAGE7O76087 117 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 GAGE12FP0CL80 117 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 GAGE12GP0CL81 117 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 GAGE12IP0CL82 117 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 BMPERQ8N8U9 685 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 LINC00477Q96M19 166 aa10.4□□□□□ -0.74
CDH11-201ENST00000268603 D6R8Y8 96 aa10.4□□□□□ -0.75
CDH11-201ENST00000268603 LIMS1P48059 325 aa10.4□□□□□ -0.75
CDH11-201ENST00000268603 PLPPR1Q8TBJ4 325 aa10.4□□□□□ -0.75
CDH11-201ENST00000268603 MRPS18AQ9NVS2 196 aaKnown RBP10.4□□□□□ -0.75
CDH11-201ENST00000268603 YPEL1O60688 119 aa10.39□□□□□ -0.75
CDH11-201ENST00000268603 YPEL2Q96QA6 119 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms