RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 WNT10AQ9GZT5 417 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 PRDM13Q9H4Q3 707 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 CELSR2Q9HCU4 2923 aa16.29■□□□□ 0.2
LYSMD2-201ENST00000267838 DEFA6Q01524 100 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 ACTL10Q5JWF8 245 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 Q5PR19 223 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 SLC25A33Q9BSK2 321 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 MRPL36Q9P0J6 103 aaKnown RBP16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 VPS13CQ709C8 3753 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 A0A0U1RQK1 487 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 A0A1W2PPQ1 181 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 RNF223E7ERA6 249 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 PKIAP61925 76 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 THAP8Q8NA92 274 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 MEGF9Q9H1U4 602 aa16.28■□□□□ 0.2
LYSMD2-201ENST00000267838 NDPQ00604 133 aa16.27■□□□□ 0.2
LYSMD2-201ENST00000267838 HIST2H2BCQ6DN03 193 aa16.27■□□□□ 0.2
LYSMD2-201ENST00000267838 MBD6Q96DN6 1003 aa16.27■□□□□ 0.2
LYSMD2-201ENST00000267838 RASL11BQ9BPW5 248 aa16.27■□□□□ 0.2
LYSMD2-201ENST00000267838 XKRY2A2RUG3 117 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 TSTD3H0UI37 97 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 CXorf1O96002 111 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 MT-CO2P00403 227 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 AVPP01185 164 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 HLA-DRB1P01911 266 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 GATA2P23769 480 aaPredicted RBP16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 LINC01551Q86U37 167 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 MAPK1IP1LQ8NDC0 245 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 C22orf15Q8WYQ4 148 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 ELOVL1Q9BW60 279 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 IGKV1D-37A0A075B6S9 117 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 NBPF19A0A087WUL8 3843 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 IGHV7-81A0A0B4J1V7 117 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 STAG3L2P0CL84 134 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 STAG3L3P0CL85 134 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 RHOBP62745 196 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 KLF17Q5JT82 389 aaPredicted RBP16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 C9orf152Q5JTZ5 239 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 ASPHD1Q5U4P2 390 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 CST9LP1Q5W188 147 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 CDPF1Q6NVV7 123 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 OR1L6Q8NGR2 347 aa16.26■□□□□ 0.19
LYSMD2-201ENST00000267838 FASNP49327 2511 aaKnown RBP16.25■□□□□ 0.19
LYSMD2-201ENST00000267838 IGHV3-21A0A0B4J1V1 117 aa16.25■□□□□ 0.19
LYSMD2-201ENST00000267838 TCRBV4S1A1TA0A5B7 111 aa16.25■□□□□ 0.19
LYSMD2-201ENST00000267838 NPPCP23582 126 aa16.25■□□□□ 0.19
LYSMD2-201ENST00000267838 JOSD1Q15040 202 aaPredicted RBP16.25■□□□□ 0.19
LYSMD2-201ENST00000267838 TMEM116Q8NCL8 245 aa16.25■□□□□ 0.19
LYSMD2-201ENST00000267838 NPIPB5A8MRT5 1133 aa16.24■□□□□ 0.19
LYSMD2-201ENST00000267838 SEPSECSQ9HD40 501 aaKnown RBP16.24■□□□□ 0.19
LYSMD2-201ENST00000267838 PTPN13Q12923 2485 aa16.24■□□□□ 0.19
LYSMD2-201ENST00000267838 I3L2K1 104 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 J3QLI3 93 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 TGFAP01135 160 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 AMBPP02760 352 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 RD3LP0DJH9 198 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 ATP5G3P48201 142 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 TTC9CQ8N5M4 171 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 PIFOQ8TCI5 191 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 SOX21Q9Y651 276 aaPredicted RBP16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 GCGP01275 180 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 ARL14EPLP0DKL9 152 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 EGR2P11161 476 aaPredicted RBP16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 UBE2G2P60604 165 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 ZNF90Q03938 601 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 SPATA31B1PQ5VZV4 182 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 PRSS57Q6UWY2 283 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 RBM14Q96PK6 669 aaKnown RBP16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 HSPB9Q9BQS6 159 aa16.23■□□□□ 0.19
LYSMD2-201ENST00000267838 MDFIC2A0A1B0GVS7 189 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 NDUFB4O95168 129 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 SELENOTP62341 195 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 FOXL1Q12952 345 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 FAM78BQ5VT40 261 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 Q96MF0 132 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 TRGV9Q99603 122 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 C19orf24Q9BVV8 132 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 TNFRSF19Q9NS68 423 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 FUT9Q9Y231 359 aa16.22■□□□□ 0.19
LYSMD2-201ENST00000267838 POLQO75417 2590 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 IGHV4-31P0DP07 118 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 TMEM219Q86XT9 240 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 KRTAP1-3Q8IUG1 177 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 C5orf56Q8N8D9 126 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 TMEM18Q96B42 140 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 MOB4Q9Y3A3 225 aa16.21■□□□□ 0.19
LYSMD2-201ENST00000267838 CSMD2Q7Z408 3487 aa16.21■□□□□ 0.18
LYSMD2-201ENST00000267838 K7EIM0 57 aa16.21■□□□□ 0.18
LYSMD2-201ENST00000267838 LINC00469Q8N7U9 141 aa16.21■□□□□ 0.18
LYSMD2-201ENST00000267838 CR1P17927 2039 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 ABCA12Q86UK0 2595 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 OR5G3P0C626 314 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 MIR17HGQ75NE6 70 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 OR5T1Q8NG75 326 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 SFRP2Q96HF1 295 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 ARL2-SNX15V9GYD0 113 aa16.2■□□□□ 0.18
LYSMD2-201ENST00000267838 IGLV11-55A0A075B6I3 123 aa16.19■□□□□ 0.18
LYSMD2-201ENST00000267838 TRAV9-1A0A075B6T8 112 aa16.19■□□□□ 0.18
LYSMD2-201ENST00000267838 PSMB11A5LHX3 300 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms