RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ATP5IP56385 69 aaPredicted RBP10.64□□□□□ -0.71
NUP54-201ENST00000264883 CR1LQ2VPA4 569 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 LINC00696Q6ZRV3 163 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 FAM90A1Q86YD7 464 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 KLF14Q8TD94 323 aaPredicted RBP10.64□□□□□ -0.71
NUP54-201ENST00000264883 S1PR3Q99500 378 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 TMEM140Q9NV12 185 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 FAM186AA6NE01 2351 aa10.64□□□□□ -0.71
NUP54-201ENST00000264883 NCR2O95944 276 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 TIMM23BQ5SRD1 257 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 IGF2-ASQ6U949 168 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 ADAMTSL5Q6ZMM2 481 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 STXBP6Q8NFX7 210 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 OR9G4Q8NGQ1 327 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 SLC25A33Q9BSK2 321 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 ENY2Q9NPA8 101 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 FOXA2Q9Y261 457 aaPredicted RBP10.63□□□□□ -0.71
NUP54-201ENST00000264883 SOX21Q9Y651 276 aaPredicted RBP10.63□□□□□ -0.71
NUP54-201ENST00000264883 IGHV3-64DA0A0J9YX35 117 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 C15orf61A6NNL5 157 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 J3QR89 54 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 WNT9BO14905 357 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 SMAD7O15105 426 aaKnown RBP10.63□□□□□ -0.71
NUP54-201ENST00000264883 CSN3P07498 182 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 TCTEX1D4Q5JR98 221 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.63□□□□□ -0.71
NUP54-201ENST00000264883 OR4X2Q8NGF9 303 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 RFESDQ8TAC1 157 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 PGLYRP4Q96LB8 373 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 ZNF747Q9BV97 191 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 C7orf69Q9H7B7 122 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 GNG12Q9UBI6 72 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 MED13Q9UHV7 2174 aa10.63□□□□□ -0.71
NUP54-201ENST00000264883 FREM1Q5H8C1 2179 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 CHEK1O14757 476 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 TMEM116Q8NCL8 245 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 SPATA25Q9BR10 227 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 RPP21Q9H633 154 aaKnown RBP10.62□□□□□ -0.71
NUP54-201ENST00000264883 TRAV5A0A0B4J249 113 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 SIVA1O15304 175 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 PROP1O75360 226 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 MPV17P39210 176 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 C3AR1Q16581 482 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 ZNF329Q86UD4 541 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 MDS2Q8NDY4 140 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 OR2Z1Q8NG97 314 aa10.62□□□□□ -0.71
NUP54-201ENST00000264883 IGKV1OR2-108A0A075B7D4 117 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 FBLL1A6NHQ2 334 aaKnown RBP10.61□□□□□ -0.71
NUP54-201ENST00000264883 A8MWL6 223 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 SMIM13P0DJ93 91 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 HSPE1P61604 102 aaKnown RBP10.61□□□□□ -0.71
NUP54-201ENST00000264883 LTC4SQ16873 150 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 CFAP161Q6P656 301 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 FOXI2Q6ZQN5 318 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 GTSF1Q8WW33 167 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 NEU4Q8WWR8 484 aaPredicted RBP10.61□□□□□ -0.71
NUP54-201ENST00000264883 ABHD17AQ96GS6 310 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 SLC25A2Q9BXI2 301 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 TEX50A0A1B0GTY4 177 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 K7EQM0 130 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 IGHV1-2P23083 117 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 ZNF826PQ6ZT77 177 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 MOB3BQ86TA1 216 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 FAM222BQ8WU58 562 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 BLNKQ8WV28 456 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 FAM167A-AS1Q96KT0 104 aa10.61□□□□□ -0.71
NUP54-201ENST00000264883 MRPL32Q9BYC8 188 aaKnown RBP10.61□□□□□ -0.71
NUP54-201ENST00000264883 TRGV5A0A0B4J1U4 118 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 MGST3O14880 152 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 TIMM8AO60220 97 aaPredicted RBP10.6□□□□□ -0.71
NUP54-201ENST00000264883 IGHV3-7P01780 117 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 FCGR2BP31994 310 aaPredicted RBP10.6□□□□□ -0.71
NUP54-201ENST00000264883 TCTAP57738 103 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 MORN5Q5VZ52 161 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 C1orf162Q8NEQ5 155 aaPredicted RBP10.6□□□□□ -0.71
NUP54-201ENST00000264883 DDB2Q92466 427 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 MRAP2Q96G30 205 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 HINT2Q9BX68 163 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 TMEM14BQ9NUH8 114 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 AP5S1Q9NUS5 200 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 KLK10O43240 276 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 APOHP02749 345 aaPredicted RBP10.6□□□□□ -0.71
NUP54-201ENST00000264883 PRDX2P32119 198 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 CSN1S1P47710 185 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 POU2AF1Q16633 256 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 Q6ZT83 130 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 VGLL1Q99990 258 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
NUP54-201ENST00000264883 SPANXB1Q9NS25 103 aaPredicted RBP10.6□□□□□ -0.71
NUP54-201ENST00000264883 INSIG2Q9Y5U4 225 aa10.6□□□□□ -0.71
NUP54-201ENST00000264883 IGKV3-15P01624 115 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 PYYP10082 97 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 GNG5P63218 68 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 CXorf67Q86X51 503 aaPredicted RBP10.59□□□□□ -0.71
NUP54-201ENST00000264883 FER1L6-AS2Q96M78 137 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 IFI27L2Q9H2X8 130 aa10.59□□□□□ -0.71
NUP54-201ENST00000264883 MBNL2Q5VZF2 373 aaKnown RBP10.59□□□□□ -0.71
NUP54-201ENST00000264883 RBPMS2Q6ZRY4 209 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms