RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 LINC00312Q9Y6C7 94 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 SPEM2Q0P670 501 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 C1orf210Q8IVY1 113 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 FOXC2Q99958 501 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 FNDC4Q9H6D8 234 aaPredicted RBP9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 GPR6P46095 362 aaPredicted RBP9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 KIR3DS1Q14943 382 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 ZNF418Q8TF45 676 aaPredicted RBP9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 CD55P08174 381 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 TMPRSS3P57727 454 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 PDE6HQ13956 83 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 C9orf118A6NHY6 69 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 NUP35Q8NFH5 326 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 CT55Q8WUE5 264 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 Q9H3A6 140 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 PHLDA3Q9Y5J5 127 aa9.72□□□□□ -0.85
DNMT3A-201ENST00000264709 FAM53AQ6NSI3 398 aaPredicted RBP9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 RPP25Q9BUL9 199 aaKnown RBP9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 K7EP34 96 aa9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 RPL15P61313 204 aaKnown RBP9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 IMMP1LQ96LU5 166 aa9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 TMEM74BQ9NUR3 256 aa9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 LGALS3P17931 250 aaKnown RBP9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 CACNG7P62955 275 aa9.71□□□□□ -0.85
DNMT3A-201ENST00000264709 LOC102723996A0A087X1L8 192 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 ZNF815PA8K554 130 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 ZNF585BQ52M93 769 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 DNASE2BQ8WZ79 361 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 ZNF492Q9P255 531 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 LTBP2Q14767 1821 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 CLPSP04118 112 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 CDKN1AP38936 164 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 TRBV20-1A0A075B6N2 111 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 TRIP6Q15654 476 aaKnown RBP9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 VKORC1L1Q8N0U8 176 aa9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 MBNL3Q9NUK0 354 aaKnown RBP9.71□□□□□ -0.86
DNMT3A-201ENST00000264709 SMIM27A0A1W2PRY6 76 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 NPIPB3Q92617 1050 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 LILRA1O75019 489 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 GUSBP1Q15486 140 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 MBNL2Q5VZF2 373 aaKnown RBP9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 FBXL7Q9UJT9 491 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 TRBV20OR9-2A0A075B6H5 130 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 AHRRA9YTQ3 701 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 ATXN7O15265 892 aaPredicted RBP9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 PSG1P11464 419 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 TRGV9Q99603 122 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 LYPD6Q86Y78 171 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 NHP2Q9NX24 153 aaKnown RBP9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 PILRBQ9UKJ0 227 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 NCOR2Q9Y618 2525 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 MFAP4P55083 255 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 ALKBH6Q3KRA9 238 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 A8MWV9 139 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 IGLV3-1P01715 115 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 ST6GALNAC6Q969X2 333 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 UPK2O00526 184 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 PRSS2P07478 247 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 COX8AP10176 69 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 GLRXP35754 106 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 CLEC7AQ9BXN2 247 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 FSCN3Q9NQT6 498 aa9.7□□□□□ -0.86
DNMT3A-201ENST00000264709 TECTAO75443 2155 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 H7C1H1 209 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 STPG4Q8N801 248 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 FER1L6-AS1Q8NA97 138 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 PKD1L2Q7Z442 2459 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 C16orf97H3BN30 126 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 CLEC2AQ6UVW9 174 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 GFRA3O60609 400 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 VWC2Q2TAL6 325 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 C15orf62A8K5M9 175 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 OR10W1Q8NGF6 305 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 RPL39P5Q59GN2 51 aa9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 BEX4Q9NWD9 120 aaPredicted RBP9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 SAA2P0DJI9 122 aaPredicted RBP9.69□□□□□ -0.86
DNMT3A-201ENST00000264709 COL4A6Q14031 1691 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 COX7A1P24310 79 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 RIPPLY3P57055 190 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 GAGE2EQ4V326 116 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 DEFB125Q8N687 156 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 OR13A1Q8NGR1 328 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 GAGE2DQ9UEU5 116 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 CPAMD8Q8IZJ3 1885 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 TOMM40O96008 361 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 CTSBP07858 339 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 SP9P0CG40 484 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 CD300EQ496F6 205 aaPredicted RBP9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 KLF5Q13887 457 aaPredicted RBP9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 IGKCP01834 107 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 DLX6P56179 175 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 CSTL1Q9H114 145 aa9.68□□□□□ -0.86
DNMT3A-201ENST00000264709 SMAD7O15105 426 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms