RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 LY6DQ14210 128 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 C15orf32Q32M92 178 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 OVOL1O14753 267 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 PRCDQ00LT1 54 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 ALPK2Q86TB3 2170 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 MCM3APO60318 1980 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 SELLP14151 372 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 ZNF138P52744 262 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 TRAV41A0A0B4J266 112 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 FCN3O75636 299 aa12.48□□□□□ -0.41
NID1-201ENST00000264187 KLF17Q5JT82 389 aaPredicted RBP12.48□□□□□ -0.41
NID1-201ENST00000264187 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 RREB1Q92766 1687 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 ABCA1O95477 2261 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 SLC25A39Q9BZJ4 359 aaPredicted RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 SPTBN1Q01082 2364 aaKnown RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 SMKR1H3BMG3 65 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 DUTP33316 252 aaKnown RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 MAJINQ3KP22 176 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 AMBPP02760 352 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 RPL36AP83881 106 aaKnown RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 NR2C2APQ86WQ0 139 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 C14orf178Q8N769 122 aaPredicted RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 RPL36ALQ969Q0 106 aaKnown RBP12.47□□□□□ -0.41
NID1-201ENST00000264187 SPXQ9BT56 116 aa12.47□□□□□ -0.41
NID1-201ENST00000264187 IGKV1-9A0A0C4DH69 117 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 LY6G6FQ5SQ64 297 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 FAM90A1Q86YD7 464 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 A0A087WWL8 130 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 DOCK10Q96BY6 2186 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 PSG1P11464 419 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 RFNGQ9Y644 331 aa12.46□□□□□ -0.41
NID1-201ENST00000264187 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.42
NID1-201ENST00000264187 NCOR1O75376 2440 aa12.46□□□□□ -0.42
NID1-201ENST00000264187 IGFBP3P17936 291 aaPredicted RBP12.45□□□□□ -0.42
NID1-201ENST00000264187 TREML4Q6UXN2 200 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 BRD3OSQ6XYD6 125 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 RPUSD1Q9UJJ7 312 aaKnown RBP12.45□□□□□ -0.42
NID1-201ENST00000264187 TRIP12Q14669 1992 aaPredicted RBP12.45□□□□□ -0.42
NID1-201ENST00000264187 IFI6P09912 130 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 RNASE6Q93091 150 aaKnown RBP12.45□□□□□ -0.42
NID1-201ENST00000264187 GGTLC1Q9BX51 225 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 CSTL1Q9H114 145 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 ITGB4P16144 1822 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 MPV17L2Q567V2 206 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 HIST3H2BBQ8N257 126 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 RASL10AQ92737 203 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 BTCP35070 178 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 TMEM256Q8N2U0 113 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 ZNF114Q8NC26 417 aa12.45□□□□□ -0.42
NID1-201ENST00000264187 TNFSF13O75888 250 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 IGHV1-18A0A0C4DH31 117 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 DEFB130BP0DP73 79 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 DEFB130AP0DP74 79 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 HGFACQ04756 655 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 ERCC8Q13216 396 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 RALGAPA1Q6GYQ0 2036 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 FGFBP3Q8TAT2 258 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 PLEKHB2Q96CS7 222 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 VMO1Q7Z5L0 202 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 MBNL3Q9NUK0 354 aaKnown RBP12.44□□□□□ -0.42
NID1-201ENST00000264187 A0A0A6YYD4 124 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 UBE2CO00762 179 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 LEPROTO15243 131 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 ZNF329Q86UD4 541 aa12.44□□□□□ -0.42
NID1-201ENST00000264187 PRIMA1Q86XR5 153 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 MGST2Q99735 147 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 WDR83OSQ9Y284 106 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 TMEM158Q8WZ71 300 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 C9JAW5 83 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 SH2D1AO60880 128 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 IGHV1-46P01743 117 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 SMPXQ9UHP9 88 aa12.43□□□□□ -0.42
NID1-201ENST00000264187 CSRP2Q16527 193 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 DLX4Q92988 240 aaPredicted RBP12.42□□□□□ -0.42
NID1-201ENST00000264187 KIAA1551Q9HCM1 1747 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 C5orf24Q7Z6I8 188 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 TRAV3A0A0B4J244 114 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 ID3Q02535 119 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 ANKRD31Q8N7Z5 1873 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 IGHV2-26A0A0B4J1V2 119 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 MESP1Q9BRJ9 268 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 SPINK8P0C7L1 97 aa12.42□□□□□ -0.42
NID1-201ENST00000264187 F8VVB4 439 aa12.41□□□□□ -0.42
NID1-201ENST00000264187 F8VWA3 439 aa12.41□□□□□ -0.42
NID1-201ENST00000264187 LINC00271P0C7V0 271 aa12.41□□□□□ -0.42
NID1-201ENST00000264187 SLC25A48Q6ZT89 311 aaKnown RBP12.41□□□□□ -0.42
NID1-201ENST00000264187 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.41□□□□□ -0.42
NID1-201ENST00000264187 PSG3Q16557 428 aa12.41□□□□□ -0.42
NID1-201ENST00000264187 FOXF2Q12947 444 aa12.41□□□□□ -0.42
NID1-201ENST00000264187 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 CFHR3Q02985 330 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 ZC2HC1BQ5TFG8 222 aa12.4□□□□□ -0.42
NID1-201ENST00000264187 SPRR3Q9UBC9 169 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms