RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 EIF3GO75821 320 aaKnown RBP eCLIP17.55■□□□□ 0.4
UFD1-201ENST00000263202 CDC34P49427 236 aaPredicted RBP17.55■□□□□ 0.4
UFD1-201ENST00000263202 PLP1P60201 277 aa17.55■□□□□ 0.4
UFD1-201ENST00000263202 ZNF343Q6P1L6 599 aa17.55■□□□□ 0.4
UFD1-201ENST00000263202 MYOZ3Q8TDC0 251 aa17.55■□□□□ 0.4
UFD1-201ENST00000263202 MBD3L1Q8WWY6 194 aa17.55■□□□□ 0.4
UFD1-201ENST00000263202 RAB24Q969Q5 203 aa17.55■□□□□ 0.4
UFD1-201ENST00000263202 DOK5Q9P104 306 aa17.55■□□□□ 0.4
UFD1-201ENST00000263202 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.54■□□□□ 0.4
UFD1-201ENST00000263202 CTXND1A0A1B0GTU2 59 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 NDUFA7O95182 113 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 PATE2Q6UY27 113 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 COMMD1Q8N668 190 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 OR51G1Q8NGK1 321 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 LINC01006Q8NI28 216 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 SFT2D1Q8WV19 159 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 ZNF414Q96IQ9 312 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 C19orf24Q9BVV8 132 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 SEPSECSQ9HD40 501 aaKnown RBP17.54■□□□□ 0.4
UFD1-201ENST00000263202 DNAJC4Q9NNZ3 241 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 A0A1W2PPV4 95 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 TEX46H3BTG2 121 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 SPSB3Q6PJ21 355 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 ZNF491Q8N8L2 437 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 OR4X2Q8NGF9 303 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 OR1L4Q8NGR5 311 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 GATAD1Q8WUU5 269 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 PFDN5Q99471 154 aa17.54■□□□□ 0.4
UFD1-201ENST00000263202 PPP5D1E7EU14 171 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 COX7A2P2O60397 106 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 OR5G3P0C626 314 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 ORM2P19652 201 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 RHOBP62745 196 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 SRSF2Q01130 221 aaKnown RBP17.53■□□□□ 0.4
UFD1-201ENST00000263202 NDUFA5Q16718 116 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 FAM78BQ5VT40 261 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 LCN15Q6UWW0 184 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 OR5AU1Q8NGC0 362 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 OR1B1Q8NGR6 318 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 WIPF2Q8TF74 440 aaPredicted RBP17.53■□□□□ 0.4
UFD1-201ENST00000263202 Q8WTZ3 238 aa17.53■□□□□ 0.4
UFD1-201ENST00000263202 WI2-2373I1.2A0A1W2PRP0 233 aa17.52■□□□□ 0.4
UFD1-201ENST00000263202 HMGB3O15347 200 aaKnown RBP17.52■□□□□ 0.4
UFD1-201ENST00000263202 TRBV12-3P01733 135 aa17.52■□□□□ 0.4
UFD1-201ENST00000263202 LYZP61626 148 aa17.52■□□□□ 0.4
UFD1-201ENST00000263202 SPATA31B1PQ5VZV4 182 aa17.52■□□□□ 0.4
UFD1-201ENST00000263202 SLC7A5P1Q8MH63 180 aa17.52■□□□□ 0.4
UFD1-201ENST00000263202 MED9Q9NWA0 146 aa17.52■□□□□ 0.4
UFD1-201ENST00000263202 NF1P21359 2839 aa17.52■□□□□ 0.39
UFD1-201ENST00000263202 ELOA3CA0A087WX78 387 aaPredicted RBP17.51■□□□□ 0.39
UFD1-201ENST00000263202 TRAV1-1A0A0B4J248 108 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 A0A1B0GV50 99 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 MAP1LC3B2A6NCE7 125 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 OR2C1O95371 312 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 C10orf113Q5VZT2 155 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 ZNF600Q6ZNG1 722 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 MAP1LC3BQ9GZQ8 125 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 GNB4Q9HAV0 340 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 FUT9Q9Y231 359 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 HYPMO75409 117 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 IL4P05112 153 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 ARL3P36405 182 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 RNF125Q96EQ8 232 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 PFDN2Q9UHV9 154 aa17.51■□□□□ 0.39
UFD1-201ENST00000263202 PUS1Q9Y606 427 aaKnown RBP eCLIP17.51■□□□□ 0.39
UFD1-201ENST00000263202 IGHV3-35A0A0C4DH35 117 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 ANKRD34BA5PLL1 514 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 HBE1P02100 147 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 FGF8P55075 233 aaPredicted RBP17.5■□□□□ 0.39
UFD1-201ENST00000263202 CCL20P78556 96 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 MIR17HGQ75NE6 70 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 UBE2E2Q96LR5 201 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 UHRF2Q96PU4 802 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 RNF2Q99496 336 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 PBDC1Q9BVG4 233 aa17.5■□□□□ 0.39
UFD1-201ENST00000263202 TCTEX1D4Q5JR98 221 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 MORN5Q5VZ52 161 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 OR5B12Q96R08 314 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 MRPL32Q9BYC8 188 aaKnown RBP17.49■□□□□ 0.39
UFD1-201ENST00000263202 MRPL27Q9P0M9 148 aaKnown RBP17.49■□□□□ 0.39
UFD1-201ENST00000263202 STAG3L2P0CL84 134 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 STAG3L3P0CL85 134 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 RELQ04864 619 aaPredicted RBP17.49■□□□□ 0.39
UFD1-201ENST00000263202 LINC00305Q7Z4B0 112 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 COMMD7Q86VX2 200 aa17.49■□□□□ 0.39
UFD1-201ENST00000263202 PEF1Q9UBV8 284 aaKnown RBP17.49■□□□□ 0.39
UFD1-201ENST00000263202 USF2Q15853 346 aaPredicted RBP17.48■□□□□ 0.39
UFD1-201ENST00000263202 FAM209BQ5JX69 171 aa17.48■□□□□ 0.39
UFD1-201ENST00000263202 OR4F5Q8NH21 305 aa17.48■□□□□ 0.39
UFD1-201ENST00000263202 HIGD1AQ9Y241 93 aa17.48■□□□□ 0.39
UFD1-201ENST00000263202 BMPR1BO00238 502 aa17.47■□□□□ 0.39
UFD1-201ENST00000263202 TOMM20LQ6UXN7 152 aa17.47■□□□□ 0.39
UFD1-201ENST00000263202 IL34Q6ZMJ4 242 aa17.47■□□□□ 0.39
UFD1-201ENST00000263202 MARC2Q969Z3 335 aa17.47■□□□□ 0.39
UFD1-201ENST00000263202 ZFAND3Q9H8U3 227 aa17.47■□□□□ 0.39
UFD1-201ENST00000263202 LGALS1P09382 135 aaKnown RBP17.46■□□□□ 0.39
UFD1-201ENST00000263202 TECRQ9NZ01 308 aaKnown RBP17.46■□□□□ 0.39
UFD1-201ENST00000263202 RNF114Q9Y508 228 aa17.46■□□□□ 0.39
UFD1-201ENST00000263202 TRAV5A0A0B4J249 113 aa17.45■□□□□ 0.38
UFD1-201ENST00000263202 NUDT19A8MXV4 375 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms