RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 OBP2BQ9NPH6 170 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 SMIM13P0DJ93 91 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 TBC1D28Q2M2D7 210 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 EPDR1Q9UM22 224 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 TRAV26-1A0A087WT03 109 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 SIVA1O15304 175 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 MOSP00540 346 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 TM4SF20Q53R12 229 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 CT83Q5H943 113 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 C10orf113Q5VZT2 155 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 CCDC144NLQ6NUI1 221 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 GUSBP11Q6P575 273 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 ZADH2Q8N4Q0 377 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 OR2Z1Q8NG97 314 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 PRR7Q8TB68 274 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 PRSS22Q9GZN4 317 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 JPT1Q9UK76 154 aa5.86□□□□□ -1.47
CSDE1-201ENST00000261443 A0A1W2PQM1 296 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 PINLYPA6NC86 204 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 C22orf46C9J442 243 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 KLF7O75840 302 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-201ENST00000261443 FCGR2BP31994 310 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-201ENST00000261443 ZNF134P52741 427 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 CRYBA4P53673 196 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 BLNKQ8WV28 456 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 ABHD17AQ96GS6 310 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 GFRA4Q9GZZ7 299 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 INSIG2Q9Y5U4 225 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 F11RQ9Y624 299 aaKnown RBP5.85□□□□□ -1.47
CSDE1-201ENST00000261443 PGPA6NDG6 321 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 ACP1P24666 158 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 TNCP24821 2201 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 NMUP48645 174 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 HES3Q5TGS1 186 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 PDPNQ86YL7 162 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 DDB2Q92466 427 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 IFI27L2Q9H2X8 130 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 C12orf49Q9H741 205 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 PRNDQ9UKY0 176 aa5.85□□□□□ -1.47
CSDE1-201ENST00000261443 EP300Q09472 2414 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-201ENST00000261443 CNOT1A5YKK6 2376 aaKnown RBP5.85□□□□□ -1.47
CSDE1-201ENST00000261443 DYSFO75923 2080 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-201ENST00000261443 SPAARA0A1B0GVQ0 90 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 PRCDQ00LT1 54 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 C1orf229Q6ZS94 237 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-201ENST00000261443 PPP1R32Q7Z5V6 425 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 FAM90A1Q86YD7 464 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 LEAP2Q969E1 77 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 FXYD5Q96DB9 178 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 VGLL1Q99990 258 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 MLST8Q9BVC4 326 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 C19orf71A6NCJ1 209 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 K7EQM0 130 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 HAX1O00165 279 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 PLAUP00749 431 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 GCSHP23434 173 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 CD69Q07108 199 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 C2orf83Q53S99 150 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 PCP2Q8IVA1 136 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 C11orf53Q8IXP5 236 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 PIP4P2Q8N4L2 257 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 OR1L4Q8NGR5 311 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 ZNF48Q96MX3 618 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-201ENST00000261443 ZNF714Q96N38 554 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 KLF12Q9Y4X4 402 aa5.84□□□□□ -1.47
CSDE1-201ENST00000261443 DNAJC13O75165 2243 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 SRRM4A7MD48 611 aaKnown RBP5.84□□□□□ -1.48
CSDE1-201ENST00000261443 IQCF6A8MYZ5 107 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 COL8A1P27658 744 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 CACNG7P62955 275 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 WFDC2Q14508 124 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 LGALS9BQ3B8N2 356 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 LGALS9CQ6DKI2 356 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 ITLN1Q8WWA0 313 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 SPATA25Q9BR10 227 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 ZNF492Q9P255 531 aa5.84□□□□□ -1.48
CSDE1-201ENST00000261443 CELA3AP09093 270 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 MC5RP33032 325 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 MYCNOSP40205 109 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 TCTEX1D4Q5JR98 221 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 PATE2Q6UY27 113 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 FOXI2Q6ZQN5 318 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 RPRMLQ8N4K4 120 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 CD177Q8N6Q3 437 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 STXBP6Q8NFX7 210 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 FMC1Q96HJ9 113 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 PLSCR4Q9NRQ2 329 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 SPANXB1Q9NS25 103 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-201ENST00000261443 C19orf67A6NJJ6 358 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 F8W1H4 67 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 FAM106CPP0CH98 169 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 RNASE2P10153 161 aaKnown RBP5.83□□□□□ -1.48
CSDE1-201ENST00000261443 LOXL3P58215 753 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 SSBP2P81877 361 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-201ENST00000261443 FAM106AQ4KMX7 169 aa5.83□□□□□ -1.48
CSDE1-201ENST00000261443 BCL6BQ8N143 479 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-201ENST00000261443 OR1L8Q8NGR8 309 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms