RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CLPSP04118 112 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 TPTE2P1Q5T6R2 138 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 SLC25A20O43772 301 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 SAMD13Q5VXD3 122 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 RNF144BQ7Z419 303 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 PCP4P48539 62 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 LINC00205P59089 165 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 RCHY1Q96PM5 261 aa9.96□□□□□ -0.82
COL8A1-201ENST00000261037 PSPNO60542 156 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 LY6HO94772 140 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 ZNF474Q6S9Z5 364 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-201ENST00000261037 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 NXT2Q9NPJ8 142 aaKnown RBP9.95□□□□□ -0.82
COL8A1-201ENST00000261037 TMEM178BH3BS89 294 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 ZNF581Q9P0T4 197 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 THSD7BQ9C0I4 1608 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 PSG1P11464 419 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 LINC00158P58513 81 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 DEFB121Q5J5C9 76 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 GREB1Q4ZG55 1949 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 OVOL1O14753 267 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 MGST2Q99735 147 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 SLC25A39Q9BZJ4 359 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-201ENST00000261037 PLSCR4Q9NRQ2 329 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 RPUSD1Q9UJJ7 312 aaKnown RBP9.95□□□□□ -0.82
COL8A1-201ENST00000261037 SPTBP11277 2137 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 SIP14410 1827 aa9.95□□□□□ -0.82
COL8A1-201ENST00000261037 A0A1W2PRE2 83 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 ANK1P16157 1881 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 ZSWIM8A7E2V4 1837 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 H3BUX3 64 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 HOXA3O43365 443 aaPredicted RBP9.94□□□□□ -0.82
COL8A1-201ENST00000261037 TDGF1P3P51864 188 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 ID3Q02535 119 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 CRIM1Q9NZV1 1036 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 SLC25A15Q9Y619 301 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 LOC105371267A0A1B0GV96 52 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 TMEM8BA6NDV4 472 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 TCRAP04437 139 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 EFNA4P52798 201 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 Q8TAT8 98 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 LAMTOR2Q9Y2Q5 125 aa9.94□□□□□ -0.82
COL8A1-201ENST00000261037 IL18BPO95998 194 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 ZNF688P0C7X2 276 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 CLDN16Q9Y5I7 305 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 TEX38Q6PEX7 206 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 ASCL4Q6XD76 172 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 ZNF329Q86UD4 541 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 TSKUQ8WUA8 353 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 GAFA1Q96PS6 74 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 GGTLC1Q9BX51 225 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 TRGV1A0A0A0MS02 117 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 D6R8Y8 96 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 LYPD2Q6UXB3 125 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 FAM90A9PA6NNJ1 464 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 FCN3O75636 299 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 CXCL1P09341 107 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 ORMDL2Q53FV1 153 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 WDR83OSQ9Y284 106 aa9.93□□□□□ -0.82
COL8A1-201ENST00000261037 DNAJC13O75165 2243 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 SRRM5B3KS81 715 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 FBLN5Q9UBX5 448 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BKO60814 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BJP06899 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BOP23527 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 COL8A2P25067 703 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BBP33778 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BDP58876 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BCP62807 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 LAGE3Q14657 143 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST2H2BEQ16778 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 TMEM249Q2WGJ8 235 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.92□□□□□ -0.82
COL8A1-201ENST00000261037 LYZL1Q6UWQ5 148 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 PHLDA1Q8WV24 401 aaPredicted RBP9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BHQ93079 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 UBE2E2Q96LR5 201 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BNQ99877 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 HIST1H2BMQ99879 126 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 GNB1LQ9BYB4 327 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 MEGF9Q9H1U4 602 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 LSM4Q9Y4Z0 139 aaKnown RBP9.92□□□□□ -0.82
COL8A1-201ENST00000261037 A6NNC1 897 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 C5orf30Q96GV9 206 aa9.92□□□□□ -0.82
COL8A1-201ENST00000261037 H0YJW9 148 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 SH2D1AO60880 128 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 S100A7L2Q5SY68 101 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 PNRC2Q9NPJ4 139 aaKnown RBP9.91□□□□□ -0.82
COL8A1-201ENST00000261037 LINC00587B1AMM8 73 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 PRADC1Q9BSG0 188 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 TRAV9-2A0A087WT02 112 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 ATP5L2Q7Z4Y8 100 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 TNFRSF14Q92956 283 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 NAA38Q9BRA0 125 aaKnown RBP9.91□□□□□ -0.82
COL8A1-201ENST00000261037 TRAV8-4A0A0B4J246 113 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 SRRM4A7MD48 611 aaKnown RBP9.91□□□□□ -0.82
COL8A1-201ENST00000261037 GAS1P54826 345 aa9.91□□□□□ -0.82
COL8A1-201ENST00000261037 FAM166AQ6J272 317 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms