RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TMEM14DPA8MWL7 114 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.31□□□□□ -1.88
RNF38-201ENST00000259605 AZU1P20160 251 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 CD24P25063 80 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 SNAI3Q3KNW1 292 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 ZNF562Q6V9R5 426 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 H1FOOQ8IZA3 346 aaPredicted RBP3.31□□□□□ -1.88
RNF38-201ENST00000259605 TEX37Q96LM6 180 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 ZNF638Q14966 1978 aaKnown RBP3.31□□□□□ -1.88
RNF38-201ENST00000259605 IGLV1-36A0A0B4J1U3 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 GAGE12BA1L429 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 PGPEP1LA6NFU8 196 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 ZNHIT1O43257 154 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 GAGE7O76087 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 IGKV1D-16P01601 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 NHLRC4P0CG21 123 aaPredicted RBP3.31□□□□□ -1.88
RNF38-201ENST00000259605 GAGE12FP0CL80 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 GAGE12GP0CL81 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 GAGE12IP0CL82 117 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 ZNF138P52744 262 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 EWSR1Q01844 656 aaKnown RBP eCLIP3.31□□□□□ -1.88
RNF38-201ENST00000259605 KIAA0040Q15053 153 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 LINC01559Q495D7 138 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 MIC13Q5XKP0 118 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 TMEM200BQ69YZ2 307 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 ZNF474Q6S9Z5 364 aaPredicted RBP3.31□□□□□ -1.88
RNF38-201ENST00000259605 TEX43Q6ZNM6 134 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 FAM131CQ96AQ9 280 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 C1orf159Q96HA4 380 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 SMIM8Q96KF7 97 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 HIST1H4GQ99525 98 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 TMEM243Q9BU79 118 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 DUSP21Q9H596 190 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 LAMTOR3Q9UHA4 124 aa3.31□□□□□ -1.88
RNF38-201ENST00000259605 TMEM89A2RUT3 159 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 VCYO14598 125 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 NDUFB1O75438 58 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 INSL4Q14641 139 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 ZNF876PQ49A33 203 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 DMKNQ6E0U4 476 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 C5orf24Q7Z6I8 188 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 ZC2HC1AQ96GY0 325 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 PGLYRP4Q96LB8 373 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 FUT9Q9Y231 359 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 CACNA1CQ13936 2221 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 SAA2-SAA4A0A096LPE2 208 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 DIRC3C9JPN6 131 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 CTDSPLO15194 276 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 ANGP03950 147 aaKnown RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 SAA2P0DJI9 122 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 P0DMU3 169 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 FAM231AP0DMU4 169 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 FAM231CP0DMU5 169 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 RCC1P18754 421 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 PAX9P55771 341 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 WIPF2Q8TF74 440 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 ATP6V0BQ99437 205 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 CITED2Q99967 270 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 HDHD3Q9BSH5 251 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 SMDT1Q9H4I9 107 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 ATG2BQ96BY7 2078 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 LOC107984156A0A0G2JMH3 177 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 A0A1B0GV90 55 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 GAGE10A6NGK3 116 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 LINC00271P0C7V0 271 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 RPS19P39019 145 aaKnown RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 SFTA2Q6UW10 78 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 TREML4Q6UXN2 200 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 ARL17AQ8IVW1 177 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 Q96M66 194 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 A0A1B0GUT8 65 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 A0A1W2PP11 408 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 C5orf63A6NC05 138 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 HBBP68871 147 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 SRSF2Q01130 221 aaKnown RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 SRSF1Q07955 248 aaKnown RBP eCLIP3.3□□□□□ -1.88
RNF38-201ENST00000259605 C1orf194Q5T5A4 169 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 ZNF324BQ6AW86 544 aaPredicted RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 SLC25A48Q6ZT89 311 aaKnown RBP3.3□□□□□ -1.88
RNF38-201ENST00000259605 RNF138Q8WVD3 245 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 C17orf77Q96MU5 243 aa3.3□□□□□ -1.88
RNF38-201ENST00000259605 TRAV8-7A0A075B6U6 113 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 IGHV3OR16-8A0A075B7F1 116 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TRAV12-3A0A0B4J271 114 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 ETDCA0A1B0GVM5 59 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 CDC42EP2O14613 210 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 SPRY2O43597 315 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 IGHV2-5P01817 119 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 SMIM13P0DJ93 91 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 CRYBA2P53672 197 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 LINC00303Q3SY05 128 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 MORN2Q502X0 79 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 PLEKHB2Q96CS7 222 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 C16orf74Q96GX8 76 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TNFRSF12AQ9NP84 129 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 MRPL36Q9P0J6 103 aaKnown RBP3.29□□□□□ -1.88
RNF38-201ENST00000259605 MYO7BQ6PIF6 2116 aa3.29□□□□□ -1.88
RNF38-201ENST00000259605 TRAV1-1A0A0B4J248 108 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms