RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 CLEC3BP05452 202 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 ELANEP08246 267 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 H2AFB1P0C5Y9 115 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 OR5G3P0C626 314 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 SLC35B1P78383 322 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 SPATA31B1PQ5VZV4 182 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 TEX38Q6PEX7 206 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 RAB24Q969Q5 203 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 HRH4Q9H3N8 390 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.72□□□□□ -0.21
CCDC115-201ENST00000259229 TRAV1-1A0A0B4J248 108 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 TGOLN2O43493 480 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 TCF21O43680 179 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 CDC34P49427 236 aaPredicted RBP13.72□□□□□ -0.21
CCDC115-201ENST00000259229 MORN5Q5VZ52 161 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 ZNF343Q6P1L6 599 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 ACTR3CQ9C0K3 210 aaPredicted RBP13.72□□□□□ -0.21
CCDC115-201ENST00000259229 DOK5Q9P104 306 aa13.72□□□□□ -0.21
CCDC115-201ENST00000259229 WI2-2373I1.2A0A1W2PRP0 233 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 HMGB3O15347 200 aaKnown RBP13.71□□□□□ -0.22
CCDC115-201ENST00000259229 OR2C1O95371 312 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 IGHV3-11P01762 117 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 RD3LP0DJH9 198 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 CCL20P78556 96 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 SRSF2Q01130 221 aaKnown RBP13.71□□□□□ -0.22
CCDC115-201ENST00000259229 TCTEX1D4Q5JR98 221 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 LCN15Q6UWW0 184 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 ZNF491Q8N8L2 437 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 LINC01006Q8NI28 216 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 SFT2D1Q8WV19 159 aa13.71□□□□□ -0.22
CCDC115-201ENST00000259229 A0A0G2JLM5 398 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 A0A1B0GV50 99 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 MAP1LC3B2A6NCE7 125 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 PPP5D1E7EU14 171 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 NUPL2O15504 423 aaKnown RBP13.7□□□□□ -0.22
CCDC115-201ENST00000259229 NDUFA7O95182 113 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 CRYBA1P05813 215 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 NDUFA5Q16718 116 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 KLHDC1Q8N7A1 406 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 OR51G1Q8NGK1 321 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 GATAD1Q8WUU5 269 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 MAP1LC3BQ9GZQ8 125 aa13.7□□□□□ -0.22
CCDC115-201ENST00000259229 GAR1Q9NY12 217 aaKnown RBP13.7□□□□□ -0.22
CCDC115-201ENST00000259229 FABP1P07148 127 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 FGF8P55075 233 aaPredicted RBP13.69□□□□□ -0.22
CCDC115-201ENST00000259229 RHOBP62745 196 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 USF2Q15853 346 aaPredicted RBP13.69□□□□□ -0.22
CCDC115-201ENST00000259229 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 MIR17HGQ75NE6 70 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 COMMD7Q86VX2 200 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 UHRF2Q96PU4 802 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 C19orf24Q9BVV8 132 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 ZFAND3Q9H8U3 227 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 GNB4Q9HAV0 340 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 DNAJC4Q9NNZ3 241 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 FUT9Q9Y231 359 aa13.69□□□□□ -0.22
CCDC115-201ENST00000259229 COX7A2P2O60397 106 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 IL4P05112 153 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 STAG3L2P0CL84 134 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 STAG3L3P0CL85 134 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 ORM2P19652 201 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 LYZP61626 148 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 ZNF600Q6ZNG1 722 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 OR4X2Q8NGF9 303 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 OR1L4Q8NGR5 311 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 OR1B1Q8NGR6 318 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 RNF125Q96EQ8 232 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 PFDN5Q99471 154 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 SCRT1Q9BWW7 348 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 MRPL27Q9P0M9 148 aaKnown RBP13.68□□□□□ -0.22
CCDC115-201ENST00000259229 PUS1Q9Y606 427 aaKnown RBP eCLIP13.68□□□□□ -0.22
CCDC115-201ENST00000259229 IGHV3-35A0A0C4DH35 117 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 BMPR1BO00238 502 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 C10orf113Q5VZT2 155 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 COMMD1Q8N668 190 aa13.68□□□□□ -0.22
CCDC115-201ENST00000259229 MRPL32Q9BYC8 188 aaKnown RBP13.68□□□□□ -0.22
CCDC115-201ENST00000259229 ELOA3CA0A087WX78 387 aaPredicted RBP13.67□□□□□ -0.22
CCDC115-201ENST00000259229 A0A1W2PPV4 95 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 HYPMO75409 117 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 ARL3P36405 182 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 IL34Q6ZMJ4 242 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 OR5AU1Q8NGC0 362 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 Q8WTZ3 238 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 FAM167A-AS1Q96KT0 104 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 PFDN2Q9UHV9 154 aa13.67□□□□□ -0.22
CCDC115-201ENST00000259229 SCGB2A1O75556 95 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 HBE1P02100 147 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 TOMM20LQ6UXN7 152 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 MARC2Q969Z3 335 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 UBE2E2Q96LR5 201 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 OR5B12Q96R08 314 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 PBDC1Q9BVG4 233 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 SLC25A2Q9BXI2 301 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 TMPRSS5Q9H3S3 457 aa13.66□□□□□ -0.22
CCDC115-201ENST00000259229 TRAV5A0A0B4J249 113 aa13.65□□□□□ -0.22
CCDC115-201ENST00000259229 ANKRD34BA5PLL1 514 aa13.65□□□□□ -0.22
CCDC115-201ENST00000259229 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
CCDC115-201ENST00000259229 RNF2Q99496 336 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms