RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 GFI1Q99684 422 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 SS18L2Q9UHA2 77 aa10.97□□□□□ -0.65
PCDHGA3-201ENST00000253812 DOCK6Q96HP0 2047 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 H3BMM0 161 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 INAFM2P0DMQ5 153 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 LYL1P12980 280 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 EVI2AP22794 236 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 NUP35Q8NFH5 326 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 UBE2WQ96B02 151 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 NPIPB5A8MRT5 1133 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 KLF14Q8TD94 323 aaPredicted RBP10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 GGTLC1Q9BX51 225 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 MBNL3Q9NUK0 354 aaKnown RBP10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 TRPM7Q96QT4 1865 aa10.96□□□□□ -0.65
PCDHGA3-201ENST00000253812 BOD1L2Q8IYS8 172 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 PHLDA1Q8WV24 401 aaPredicted RBP10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV3OR16-12A0A075B7B8 117 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 TRAV8-3A0A0A6YYJ7 113 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV2-26A0A0B4J1V2 119 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 FCN3O75636 299 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 CEACAM8P31997 349 aaPredicted RBP10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 ATP5G2Q06055 141 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 C10orf91Q5T1B1 145 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 FAM214BQ7L5A3 538 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 TMEM86BQ8N661 226 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.66
PCDHGA3-201ENST00000253812 C16orf97H3BN30 126 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 GAS1P54826 345 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 CD69Q07108 199 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 FOXA2Q9Y261 457 aaPredicted RBP10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 RLFQ13129 1914 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 A0A1W2PPM0 123 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 TCRBV4S1A1TA0A5B7 111 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 SMIM10L1P0DMW3 83 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 SMIM10Q96HG1 83 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 LSM4Q9Y4Z0 139 aaKnown RBP10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 EFEMP2O95967 443 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 TREML4Q6UXN2 200 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 SIGLEC12Q96PQ1 595 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 C21orf62Q9NYP8 219 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 C15orf61A6NNL5 157 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 TOMM40O96008 361 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 LINC00271P0C7V0 271 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 SHISA5Q8N114 240 aa10.95□□□□□ -0.66
PCDHGA3-201ENST00000253812 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV3OR16-13A0A075B7E8 117 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV3-74A0A0B4J1X5 117 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 CRPP02741 224 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 CCL1P22362 96 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNF415Q09FC8 603 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 TMEM54Q969K7 222 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 MDC1Q14676 2089 aaKnown RBP10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 FAM90A9PA6NNJ1 464 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 Q6ZWC4 215 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 SLC50A1Q9BRV3 221 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 C1QTNF4Q9BXJ3 329 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 FAM90A27PA6NNH2 459 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 UTRNP46939 3433 aa10.94□□□□□ -0.66
PCDHGA3-201ENST00000253812 CD28P10747 220 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 TEX43Q6ZNM6 134 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 TMEM171Q8WVE6 324 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 SCRT1Q9BWW7 348 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 UPK2O00526 184 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGLL1P15814 213 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 SPSB3Q6PJ21 355 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNHIT1O43257 154 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 CFAP161Q6P656 301 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 LINC00114Q6XXX2 140 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 BMPERQ8N8U9 685 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 SBF1O95248 1867 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 VWC2LB2RUY7 222 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 RAMP3O60896 148 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 LILRA1O75019 489 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 PVRIGQ6DKI7 326 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 C18orf32Q8TCD1 76 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 CREBBPQ92793 2442 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 RALGAPA2Q2PPJ7 1873 aa10.93□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGKV1D-8A0A087WSZ0 117 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 POU2AF1Q16633 256 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 NMSQ5H8A3 153 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 BVES-AS1Q5T3Y7 98 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 TMEM14EPQ6UXP3 125 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 GATD1Q8NB37 220 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGHV2-70DA0A0C4DH43 119 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 NCR2O95944 276 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 COX8AP10176 69 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 OR13A1Q8NGR1 328 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 MCRIP2Q9BUT9 160 aaKnown RBP10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 TTTY12Q9BZ98 90 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 RNF115Q9Y4L5 304 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 IGKV3D-20A0A0C4DH25 116 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 A0A0U1RRA0 63 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 ACP7Q6ZNF0 438 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNRF1Q8ND25 227 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNF688P0C7X2 276 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 MRAPQ8TCY5 172 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 VGLL1Q99990 258 aa10.92□□□□□ -0.66
PCDHGA3-201ENST00000253812 ZNF319Q9P2F9 582 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms