RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 SLC25A10Q9UBX3 287 aaPredicted RBP9.72□□□□□ -0.85
USHBP1-201ENST00000252597 PRSS46E5RG02 174 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 LEPROTL1O95214 131 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 SFTPCP11686 197 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 CEACAM8P31997 349 aaPredicted RBP9.72□□□□□ -0.85
USHBP1-201ENST00000252597 KIR2DS2P43631 304 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 PRCDQ00LT1 54 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 OR1L4Q8NGR5 311 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 PRR7Q8TB68 274 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 TNFRSF19Q9NS68 423 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 PIEZO1Q92508 2521 aa9.72□□□□□ -0.85
USHBP1-201ENST00000252597 ZFYVE26Q68DK2 2539 aa9.71□□□□□ -0.85
USHBP1-201ENST00000252597 IGHV3-35A0A0C4DH35 117 aa9.71□□□□□ -0.85
USHBP1-201ENST00000252597 NDUFB8O95169 186 aa9.71□□□□□ -0.85
USHBP1-201ENST00000252597 RNASE2P10153 161 aaKnown RBP9.71□□□□□ -0.85
USHBP1-201ENST00000252597 BPIFB3P59826 476 aa9.71□□□□□ -0.85
USHBP1-201ENST00000252597 CIARTQ8N365 385 aaPredicted RBP9.71□□□□□ -0.85
USHBP1-201ENST00000252597 OR8A1Q8NGG7 326 aa9.71□□□□□ -0.85
USHBP1-201ENST00000252597 A0A087X0K7 114 aa9.71□□□□□ -0.86
USHBP1-201ENST00000252597 TRIP6Q15654 476 aaKnown RBP9.71□□□□□ -0.86
USHBP1-201ENST00000252597 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.86
USHBP1-201ENST00000252597 FNDC4Q9H6D8 234 aaPredicted RBP9.71□□□□□ -0.86
USHBP1-201ENST00000252597 ASCL3Q9NQ33 180 aa9.71□□□□□ -0.86
USHBP1-201ENST00000252597 FOXA2Q9Y261 457 aaPredicted RBP9.71□□□□□ -0.86
USHBP1-201ENST00000252597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.71□□□□□ -0.86
USHBP1-201ENST00000252597 NOTCH3Q9UM47 2321 aa9.71□□□□□ -0.86
USHBP1-201ENST00000252597 HIST1H1EP10412 219 aaKnown RBP9.71□□□□□ -0.86
USHBP1-201ENST00000252597 GOLT1AQ6ZVE7 132 aa9.71□□□□□ -0.86
USHBP1-201ENST00000252597 NEUROG1Q92886 237 aa9.71□□□□□ -0.86
USHBP1-201ENST00000252597 TRBV9A0A0B4J1U6 114 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 TCF15Q12870 199 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 TM4SF20Q53R12 229 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 C22orf34Q6ZV56 151 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 PRSS33Q8NF86 280 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 ALKBH7Q9BT30 221 aaPredicted RBP9.7□□□□□ -0.86
USHBP1-201ENST00000252597 SLC25A2Q9BXI2 301 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 PTPRQQ9UMZ3 2332 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 ARHGAP32A7KAX9 2087 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 TRAV17A0A0B4J275 112 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 DLL1O00548 723 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 WT1-ASQ06250 92 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 Q71RC1 249 aaPredicted RBP9.7□□□□□ -0.86
USHBP1-201ENST00000252597 FAM222BQ8WU58 562 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 C22orf15Q8WYQ4 148 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 TMEM70Q9BUB7 260 aa9.7□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF71Q9NQZ8 489 aaPredicted RBP9.7□□□□□ -0.86
USHBP1-201ENST00000252597 CNIH1O95406 144 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 IGLV2-8P01709 118 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 LDLRAD2Q5SZI1 272 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 RITA1Q96K30 269 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF430Q9H8G1 570 aaPredicted RBP9.69□□□□□ -0.86
USHBP1-201ENST00000252597 DYNLRB1Q9NP97 96 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 TRAV9-2A0A087WT02 112 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 LYNX1G3V0Z9 82 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 LYNX1P0DP58 116 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 RELQ04864 619 aaPredicted RBP9.69□□□□□ -0.86
USHBP1-201ENST00000252597 Q8N976 141 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 SRSF12Q8WXF0 261 aaKnown RBP9.69□□□□□ -0.86
USHBP1-201ENST00000252597 ADTRPQ96IZ2 230 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 SPRY4Q9C004 299 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 TRGV8A0A0C4DH27 118 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 A0A1W2PRE2 83 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 OR2T8A6NH00 312 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 J3QW42 95 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 IGHV1-46P01743 117 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 PRSS3P2Q8NHM4 247 aa9.69□□□□□ -0.86
USHBP1-201ENST00000252597 ANKHD1Q8IWZ3 2542 aaKnown RBP9.69□□□□□ -0.86
USHBP1-201ENST00000252597 NKX6-3A6NJ46 265 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 CNTFRP26992 372 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 SUB1P53999 127 aaKnown RBP eCLIP9.68□□□□□ -0.86
USHBP1-201ENST00000252597 FBLN7Q53RD9 439 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 RUSC1-AS1Q66K80 236 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF474Q6S9Z5 364 aaPredicted RBP9.68□□□□□ -0.86
USHBP1-201ENST00000252597 LINC00322Q6ZN03 302 aaPredicted RBP9.68□□□□□ -0.86
USHBP1-201ENST00000252597 SPATA12Q7Z6I5 190 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 AP1S3Q96PC3 154 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 COL27A1Q8IZC6 1860 aaPredicted RBP9.68□□□□□ -0.86
USHBP1-201ENST00000252597 F2RL2O00254 374 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 DDB2Q92466 427 aa9.68□□□□□ -0.86
USHBP1-201ENST00000252597 PATE2Q6UY27 113 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF329Q86UD4 541 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 ZNF714Q96N38 554 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 HILPDAQ9Y5L2 63 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 FBLL1A6NHQ2 334 aaKnown RBP9.67□□□□□ -0.86
USHBP1-201ENST00000252597 LINC00614P0C842 121 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 TMPRSS3P57727 454 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 HBBP68871 147 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 LYPD2Q6UXB3 125 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 TEX45Q8NA69 505 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 GRAMD2BQ96HH9 432 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 GAFA1Q96PS6 74 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 RAB9BQ9NP90 201 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 SLC25A15Q9Y619 301 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 VWC2LB2RUY7 222 aa9.67□□□□□ -0.86
USHBP1-201ENST00000252597 PPIAL4DF5H284 164 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms