RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 OOEPA6NGQ2 149 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 C9orf172C9J069 976 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 NPIPB11E5RHQ5 1161 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 CD300EQ496F6 205 aaPredicted RBP14.92□□□□□ -0.02
PTPN12-201ENST00000248594 ZNF48Q96MX3 618 aaPredicted RBP14.92□□□□□ -0.02
PTPN12-201ENST00000248594 IGHV3-21A0A0B4J1V1 117 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 VSTM5A8MXK1 200 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 H3BMG7 143 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 SMIM13P0DJ93 91 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 FAM162BQ5T6X4 162 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 LINC00322Q6ZN03 302 aaPredicted RBP14.92□□□□□ -0.02
PTPN12-201ENST00000248594 LINC00596Q86U02 117 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 OR5A1Q8NGJ0 315 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 MPC1Q9Y5U8 109 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 ZGRF1Q86YA3 2104 aa14.92□□□□□ -0.02
PTPN12-201ENST00000248594 FTH1P19P0C7X4 201 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 APOBEC3AP31941 199 aaPredicted RBP14.91□□□□□ -0.02
PTPN12-201ENST00000248594 DUTP33316 252 aaKnown RBP14.91□□□□□ -0.02
PTPN12-201ENST00000248594 CSMD1Q96PZ7 3565 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 KBTBD11-OT1A0A1B0GTJ5 212 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 PSMB11A5LHX3 300 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 APELAP0DMC3 54 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 BCL6BQ8N143 479 aaPredicted RBP14.91□□□□□ -0.02
PTPN12-201ENST00000248594 CACNA1BQ00975 2339 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 A0A1W2PRD5 423 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 A0A1W2PRF3 423 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 A0A1W2PRM7 423 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 COL8A1P27658 744 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 PROK2Q9HC23 129 aa14.91□□□□□ -0.02
PTPN12-201ENST00000248594 MBNL3Q9NUK0 354 aaKnown RBP14.91□□□□□ -0.02
PTPN12-201ENST00000248594 COL4A2P08572 1712 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 NXPH1P58417 271 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 SHISA2Q6UWI4 295 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 COLCA1Q6ZS62 124 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 COQ2Q96H96 371 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 PATE3B3GLJ2 98 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 CSN1S1P47710 185 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 LOXL1Q08397 574 aaPredicted RBP14.9□□□□□ -0.02
PTPN12-201ENST00000248594 SLC35E4Q6ICL7 350 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 FAM169BQ8N8A8 192 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 HES7Q9BYE0 225 aa14.9□□□□□ -0.02
PTPN12-201ENST00000248594 FXYD2P54710 66 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 ANXA2RQ3ZCQ2 193 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 UTF1Q5T230 341 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 CHCHD1Q96BP2 118 aaKnown RBP14.89□□□□□ -0.03
PTPN12-201ENST00000248594 WNK2Q9Y3S1 2297 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 CYC1P08574 325 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 GGNQ86UU5 652 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 GTSF1Q8WW33 167 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 PROP1O75360 226 aa14.89□□□□□ -0.03
PTPN12-201ENST00000248594 NKX2-8O15522 239 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 OR2J3O76001 311 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 SP9P0CG40 484 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 GATA3P23771 443 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 SSBP2P81877 361 aaPredicted RBP14.88□□□□□ -0.03
PTPN12-201ENST00000248594 PRR20EP86478 221 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 PRR20CP86479 221 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 PRR20DP86480 221 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 PRR20BP86481 221 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 PRR20AP86496 221 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 ZADH2Q8N4Q0 377 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 RBMXL3Q8N7X1 1067 aaKnown RBP14.88□□□□□ -0.03
PTPN12-201ENST00000248594 SLC25A33Q9BSK2 321 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 COLQQ9Y215 455 aaPredicted RBP14.88□□□□□ -0.03
PTPN12-201ENST00000248594 MOSP00540 346 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 SPINK14Q6IE38 97 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 RPP21Q9H633 154 aaKnown RBP14.88□□□□□ -0.03
PTPN12-201ENST00000248594 CACNA1HO95180 2353 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 IFI27P40305 119 aaPredicted RBP14.88□□□□□ -0.03
PTPN12-201ENST00000248594 PPP1R32Q7Z5V6 425 aa14.88□□□□□ -0.03
PTPN12-201ENST00000248594 SPTA1P02549 2419 aa14.87□□□□□ -0.03
PTPN12-201ENST00000248594 Q71RC1 249 aaPredicted RBP14.87□□□□□ -0.03
PTPN12-201ENST00000248594 SMAD7O15105 426 aaKnown RBP14.87□□□□□ -0.03
PTPN12-201ENST00000248594 CRXO43186 299 aaPredicted RBP14.87□□□□□ -0.03
PTPN12-201ENST00000248594 CIARTQ8N365 385 aaPredicted RBP14.87□□□□□ -0.03
PTPN12-201ENST00000248594 RND1Q92730 232 aa14.87□□□□□ -0.03
PTPN12-201ENST00000248594 SPAG8Q99932 426 aaPredicted RBP14.87□□□□□ -0.03
PTPN12-201ENST00000248594 IGHV3OR15-7A0A075B7D8 119 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 ZNF747Q9BV97 191 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 A0A1B0GWB2 263 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 PRSS46E5RG02 174 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 FAM87AP0C7U9 286 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 HSPE1P61604 102 aaKnown RBP14.86□□□□□ -0.03
PTPN12-201ENST00000248594 KRTAP27-1Q3LI81 207 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 RNFT1Q5M7Z0 435 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 WIPF2Q8TF74 440 aaPredicted RBP14.86□□□□□ -0.03
PTPN12-201ENST00000248594 SLC25A10Q9UBX3 287 aaPredicted RBP14.86□□□□□ -0.03
PTPN12-201ENST00000248594 LOXL2Q9Y4K0 774 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 IGHV5-10-1A0A0J9YXX1 117 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 LINC01545Q5VT33 79 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 PRNTQ86SH4 94 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 MDP1Q86V88 176 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 PKIBQ9C010 78 aa14.86□□□□□ -0.03
PTPN12-201ENST00000248594 hADV38S2A0JD32 116 aa14.85□□□□□ -0.03
PTPN12-201ENST00000248594 SP1P08047 785 aa14.85□□□□□ -0.03
PTPN12-201ENST00000248594 C20orf78Q9BR46 151 aa14.85□□□□□ -0.03
PTPN12-201ENST00000248594 INSIG2Q9Y5U4 225 aa14.85□□□□□ -0.03
PTPN12-201ENST00000248594 C10orf113Q5VZT2 155 aa14.85□□□□□ -0.03
PTPN12-201ENST00000248594 PDPNQ86YL7 162 aa14.85□□□□□ -0.03
PTPN12-201ENST00000248594 SRSF12Q8WXF0 261 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms