RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 C2orf88Q9BSF0 95 aa10.18□□□□□ -0.78
RAB3IP-201ENST00000247833 TRAV9-1A0A075B6T8 112 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 CASP6P55212 293 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 RBPJQ06330 500 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 MMDQ15546 238 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 TBR1Q16650 682 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 LCN12Q6JVE5 192 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM136Q6ZRR5 245 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 TRAV8-1A0A0A6YYK1 113 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 TRBV9A0A0B4J1U6 114 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 P01737 135 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 HIST1H1EP10412 219 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM30BQ3MIR4 351 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 Q6ZN92 141 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 NUP37Q8NFH4 326 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 NEU1Q99519 415 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 BMPR1BO00238 502 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 CHEK1O14757 476 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 IGHV1-8P0DP01 117 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 LOXP28300 417 aaPredicted RBP10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 PRRX1P54821 245 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 SLAQ13239 276 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 PRNTQ86SH4 94 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 BEND2Q8NDZ0 799 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 NCOR1P1Q9H4R4 102 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 LY96Q9Y6Y9 160 aa10.17□□□□□ -0.78
RAB3IP-201ENST00000247833 A0A1B0GWJ7 208 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 IZUMO1RA6ND01 250 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 LBHQ53QV2 105 aaPredicted RBP10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 TMEM133Q9H2Q1 129 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 FNDC10F2Z333 226 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 GPX1P07203 203 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 THBDP07204 575 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 COL8A1P27658 744 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 TFPI2P48307 235 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 PATE2Q6UY27 113 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 KCNS1Q96KK3 526 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 PTPRBP23467 1997 aa10.16□□□□□ -0.78
RAB3IP-201ENST00000247833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 E7EQL1 145 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 M0QZ24 198 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 HNRNPA3P51991 378 aaKnown RBP10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 ARF6P62330 175 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 ASCL5Q7RTU5 278 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 PNKDQ8N490 385 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 RASL11BQ9BPW5 248 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 GOLT1AQ6ZVE7 132 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 ZNF329Q86UD4 541 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 EPDR1Q9UM22 224 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 TACC2O95359 2948 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 PPIAL4CA0A0B4J2A2 164 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 A0A1W2PS18 150 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 ZNF324O75467 553 aaPredicted RBP10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 PPIAL4GP0DN37 164 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 LGALS7P47929 136 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 NUTF2P61970 127 aaKnown RBP10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 PMCHL1Q16048 86 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 COX19Q49B96 90 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 CHODLQ9H9P2 273 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 HIGD1AQ9Y241 93 aa10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 RAI1Q7Z5J4 1906 aaPredicted RBP10.15□□□□□ -0.78
RAB3IP-201ENST00000247833 DSCAML1Q8TD84 2053 aa10.15□□□□□ -0.79
RAB3IP-201ENST00000247833 SMG1Q96Q15 3661 aaKnown RBP10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 TPTE2P1Q5T6R2 138 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 CHD8Q9HCK8 2581 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 SPTBN4Q9H254 2564 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 TMSB15BA0A087X1C1 80 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 RPLP1P05386 114 aaKnown RBP10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 LINC00310P59036 64 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 EXOC3-AS1Q8N2X6 119 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 STXBP6Q8NFX7 210 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 CHRDL1Q9BU40 450 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 Q9H3A6 140 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 RNF114Q9Y508 228 aa10.14□□□□□ -0.79
RAB3IP-201ENST00000247833 NCBP2LA6PVI3 153 aaKnown RBP10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 C3orf79P0CE67 100 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 KLF17Q5JT82 389 aaPredicted RBP10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 MIEN1Q9BRT3 115 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.13□□□□□ -0.797e-17■■■■■ 33.5
RAB3IP-201ENST00000247833 IGHV2-26A0A0B4J1V2 119 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 IGHV3-35A0A0C4DH35 117 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 IGLV2-8P01709 118 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 PPP1R27Q86WC6 154 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 MUC15Q8N387 334 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 GRAMD2BQ96HH9 432 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 CLEC7AQ9BXN2 247 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 C22orf46C9J442 243 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 Q0VG73 95 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 RUSC1-AS1Q66K80 236 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 OR4B1Q8NGF8 309 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 SRSF12Q8WXF0 261 aaKnown RBP10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 FXYD5Q96DB9 178 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 CLEC5AQ9NY25 188 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 ARL2-SNX15V9GYD0 113 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 KALRNO60229 2985 aa10.13□□□□□ -0.79
RAB3IP-201ENST00000247833 IGHV3OR16-8A0A075B7F1 116 aa10.12□□□□□ -0.79
RAB3IP-201ENST00000247833 SH2D7A6NKC9 451 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms