RNA–Protein interactions for RNA: ENST00000244815.9

LRRFIP1-201, Transcript of LRR binding FLII interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRFIP1, Length 4,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-201ENST00000244815 NEUROG1Q92886 237 aa13.14□□□□□ -0.31
LRRFIP1-201ENST00000244815 PRB4P10163 310 aaPredicted RBP13.14□□□□□ -0.31
LRRFIP1-201ENST00000244815 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
LRRFIP1-201ENST00000244815 PLXNA4Q9HCM2 1894 aa13.14□□□□□ -0.31
LRRFIP1-201ENST00000244815 PFN1P07737 140 aaKnown RBP13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 SFTPCP11686 197 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 TMEM170BQ5T4T1 132 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 PVRIGQ6DKI7 326 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 LCN12Q6JVE5 192 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 RNASE6Q93091 150 aaKnown RBP13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 ZNF56Q15929 161 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 CLEC19AQ6UXS0 136 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 SPCS1Q9Y6A9 102 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 H3BUT2 72 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 SCGB3A1Q96QR1 104 aa13.13□□□□□ -0.31
LRRFIP1-201ENST00000244815 ARFGEF3Q5TH69 2177 aa13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 C10orf91Q5T1B1 145 aa13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 PSMG4Q5JS54 123 aa13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 KIR3DL3Q8N743 410 aa13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 C8orf46Q8TAG6 207 aa13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 ZNF256Q9Y2P7 627 aaPredicted RBP13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 ATP5L2Q7Z4Y8 100 aa13.12□□□□□ -0.31
LRRFIP1-201ENST00000244815 TIMM23O14925 209 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 MLANAQ16655 118 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 MDS2Q8NDY4 140 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 YLPM1P49750 1951 aaKnown RBP13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 IGKV1D-17A0A075B6S4 117 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 HBDP02042 147 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 ATP5J2P56134 94 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 SLC25A15Q9Y619 301 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 PCNX2A6NKB5 2137 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 PMS2P5A8MQ11 134 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 CACNG7P62955 275 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 IL15RAQ13261 267 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 C3orf79P0CE67 100 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 PSG1P11464 419 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 ASIPP42127 132 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 FBLN7Q53RD9 439 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 LY96Q9Y6Y9 160 aa13.11□□□□□ -0.31
LRRFIP1-201ENST00000244815 PPIFP30405 207 aaKnown RBP13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 TSPOP30536 169 aa13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 IGHV3OR16-12A0A075B7B8 117 aa13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 PRSS8Q16651 343 aa13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 EXOC3-AS1Q8N2X6 119 aa13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 NEU4Q8WWR8 484 aaPredicted RBP13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 C2orf88Q9BSF0 95 aa13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 MRPL16Q9NX20 251 aaKnown RBP13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 CRIM1Q9NZV1 1036 aa13.1□□□□□ -0.31
LRRFIP1-201ENST00000244815 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 LEPP41159 167 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 ST20Q9HBF5 79 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 DLEU1O43261 78 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 PAPPA-AS1Q5QFB9 102 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 OR5AN1Q8NGI8 311 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 TMEM167AQ8TBQ9 72 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 ASCL2Q99929 193 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 C19orf67A6NJJ6 358 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 TMEM200BQ69YZ2 307 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 PROK2Q9HC23 129 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 NPIPB5A8MRT5 1133 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 C5orf30Q96GV9 206 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 SCRT1Q9BWW7 348 aa13.09□□□□□ -0.31
LRRFIP1-201ENST00000244815 A0A1B0GWB2 263 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 CEACAM4O75871 244 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 IGHV2-5P01817 119 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 TCRAP04437 139 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 AMMECR1LQ6DCA0 310 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 ZFHX2Q9C0A1 2572 aaPredicted RBP13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 PPP1R17O96001 155 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 IGKV1-39P01597 117 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 IGKV1D-39P04432 117 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 LINC00479Q96M42 142 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 A0A1B0GUS0 222 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 IGKV1-16P04430 117 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 NUP35Q8NFH5 326 aa13.08□□□□□ -0.32
LRRFIP1-201ENST00000244815 TRAV8-1A0A0A6YYK1 113 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 LDLRAD2Q5SZI1 272 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 TNFRSF14Q92956 283 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 PTPRQQ9UMZ3 2332 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 APOMO95445 188 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 PPBPP02775 128 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 PDLIM4P50479 330 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 C19orf54Q5BKX5 351 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 PIMREGQ9BSJ6 248 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 FNDC4Q9H6D8 234 aaPredicted RBP13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 NHP2Q9NX24 153 aaKnown RBP13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 FAM181BA6NEQ2 426 aa13.07□□□□□ -0.32
LRRFIP1-201ENST00000244815 NDUFA3O95167 84 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms