RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 PRCDQ00LT1 54 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 Q6ZWC4 215 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 BEND2Q8NDZ0 799 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 GNB1LQ9BYB4 327 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 CDH23Q9H251 3354 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 MPV17L2Q567V2 206 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 IGHV1-69-2A0A0G2JMI3 117 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 RPRMLQ8N4K4 120 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 MYOZ3Q8TDC0 251 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 TMEM160Q9NX00 188 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 RABAC1Q9UI14 185 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 NACAE9PAV3 2078 aa11.28□□□□□ -0.6
NFKB1-201ENST00000226574 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 H7C2G1 150 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 IGHV1-46P01743 117 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 Q6ZR03 302 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 PRR7Q8TB68 274 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 CLEC7AQ9BXN2 247 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 FNDC4Q9H6D8 234 aaPredicted RBP11.27□□□□□ -0.6
NFKB1-201ENST00000226574 GP6Q9HCN6 339 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 TANC2Q9HCD6 1990 aa11.27□□□□□ -0.6
NFKB1-201ENST00000226574 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
NFKB1-201ENST00000226574 TRBV6-6A0A0A6YYG2 114 aa11.27□□□□□ -0.61
NFKB1-201ENST00000226574 GOSR1O95249 250 aa11.27□□□□□ -0.61
NFKB1-201ENST00000226574 TDGF1P3P51864 188 aa11.27□□□□□ -0.61
NFKB1-201ENST00000226574 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
NFKB1-201ENST00000226574 ASCL5Q7RTU5 278 aa11.27□□□□□ -0.61
NFKB1-201ENST00000226574 CACNG8Q8WXS5 425 aa11.27□□□□□ -0.61
NFKB1-201ENST00000226574 OR2T8A6NH00 312 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 H3BVH4 76 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 LINC00614P0C842 121 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 ZNF134P52741 427 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 RPUSD1Q9UJJ7 312 aaKnown RBP11.26□□□□□ -0.61
NFKB1-201ENST00000226574 C17orf100A8MU93 164 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 F2RL2O00254 374 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 NUP35Q8NFH5 326 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 PRELID3AQ96N28 172 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 ABCA2Q9BZC7 2435 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 OTOGLQ3ZCN5 2332 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 H3BUT2 72 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 AREGP15514 252 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
NFKB1-201ENST00000226574 ZNF414Q96IQ9 312 aa11.26□□□□□ -0.61
NFKB1-201ENST00000226574 A0A087X0K7 114 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 PMS2P5A8MQ11 134 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 LY6HO94772 140 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 NPPCP23582 126 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 M0R3E3 92 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 FRMD6-AS1P0C7T7 363 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 CX3CL1P78423 397 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 IGFL4Q6B9Z1 124 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 DSCAML1Q8TD84 2053 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 MMP23AO75900 390 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 CD59P13987 128 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 AMMECR1LQ6DCA0 310 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 Q6ZPA2 131 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 TEX45Q8NA69 505 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 SCRT1Q9BWW7 348 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 LINC00312Q9Y6C7 94 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-201ENST00000226574 CDX4O14627 284 aaPredicted RBP11.25□□□□□ -0.61
NFKB1-201ENST00000226574 DNLZQ5SXM8 178 aa11.25□□□□□ -0.61
NFKB1-201ENST00000226574 TRBV20OR9-2A0A075B6H5 130 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 IGKV3-15P01624 115 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 MFAP4P55083 255 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 MAJINQ3KP22 176 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 FBLN7Q53RD9 439 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 A0A1W2PS18 150 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 NPIPB5A8MRT5 1133 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 NPIPB11E5RHQ5 1161 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 IGKV3-20P01619 116 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 FABP2P12104 132 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 TMEM78Q5T7P6 136 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 NCR2O95944 276 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 LOXL3P58215 753 aa11.24□□□□□ -0.61
NFKB1-201ENST00000226574 NAV3Q8IVL0 2385 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 TSKUQ8WUA8 353 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 RCHY1Q96PM5 261 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 A1L4Q6 167 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 CACNG7P62955 275 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 HIST1H4GQ99525 98 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 C2orf16Q68DN1 1984 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 M0R381 172 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 PSG1P11464 419 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.23□□□□□ -0.61
NFKB1-201ENST00000226574 C16orf92Q96LL3 132 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 C1RLQ9NZP8 487 aa11.23□□□□□ -0.61
NFKB1-201ENST00000226574 GGTLC3B5MD39 225 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 EVI2AP22794 236 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 GPR183P32249 361 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 PSMB2P49721 201 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 C1orf162Q8NEQ5 155 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-201ENST00000226574 COL25A1Q9BXS0 654 aaPredicted RBP11.22□□□□□ -0.61
NFKB1-201ENST00000226574 TRAV9-1A0A075B6T8 112 aa11.22□□□□□ -0.61
NFKB1-201ENST00000226574 SLAQ13239 276 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms