RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 C5orf17Q8NAS9 161 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 TNFRSF14Q92956 283 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 RITA1Q96K30 269 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 RBM14Q96PK6 669 aaKnown RBP10.67□□□□□ -0.7
SRP54-201ENST00000216774 SOX21Q9Y651 276 aaPredicted RBP10.67□□□□□ -0.7
SRP54-201ENST00000216774 PGPA6NDG6 321 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 TOMM40O96008 361 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 MOSP00540 346 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 PLP1P60201 277 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 TNXAQ16473 311 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 ASPHD1Q5U4P2 390 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 BLNKQ8WV28 456 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 PRSS22Q9GZN4 317 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 TMEM133Q9H2Q1 129 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 RPP21Q9H633 154 aaKnown RBP10.67□□□□□ -0.7
SRP54-201ENST00000216774 JKAMPQ9P055 326 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 ZNF492Q9P255 531 aa10.67□□□□□ -0.7
SRP54-201ENST00000216774 CACNA1HO95180 2353 aa10.66□□□□□ -0.7
SRP54-201ENST00000216774 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
SRP54-201ENST00000216774 ENSAO43768 121 aaKnown RBP10.66□□□□□ -0.7
SRP54-201ENST00000216774 LTAP01374 205 aa10.66□□□□□ -0.7
SRP54-201ENST00000216774 GP9P14770 177 aa10.66□□□□□ -0.7
SRP54-201ENST00000216774 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
SRP54-201ENST00000216774 FAM162BQ5T6X4 162 aa10.66□□□□□ -0.7
SRP54-201ENST00000216774 RNASE6Q93091 150 aaKnown RBP10.66□□□□□ -0.7
SRP54-201ENST00000216774 A6NNC1 897 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 A8MWL6 223 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 CRYGBP07316 175 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 CASP6P55212 293 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 HBBP68871 147 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 MMDQ15546 238 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 HCP5Q6MZN7 132 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 C8orf46Q8TAG6 207 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 C20orf202A1L168 122 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 VWC2LB2RUY7 222 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 M0R2Z0 102 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 CAMPP49913 170 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 BATFQ16520 125 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 RUSC1-AS1Q66K80 236 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 C11orf42Q8N5U0 333 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 GFRA4Q9GZZ7 299 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 GOLT1BQ9Y3E0 138 aa10.65□□□□□ -0.7
SRP54-201ENST00000216774 Q6ZN92 141 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 OR8B3Q8NGG8 313 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 TMEM190Q8WZ59 177 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 OR8B2Q96RD0 313 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 TXN2Q99757 166 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 SSBP4Q9BWG4 385 aaPredicted RBP10.64□□□□□ -0.71
SRP54-201ENST00000216774 WNT10AQ9GZT5 417 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 NAV3Q8IVL0 2385 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 C19orf71A6NCJ1 209 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 P01737 135 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 TCRAP04437 139 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 BTF3P20290 206 aaKnown RBP10.64□□□□□ -0.71
SRP54-201ENST00000216774 RNASEKQ6P5S7 137 aaKnown RBP10.64□□□□□ -0.71
SRP54-201ENST00000216774 DYNLRB1Q9NP97 96 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 SIGLEC9Q9Y336 463 aa10.64□□□□□ -0.71
SRP54-201ENST00000216774 IGHV3-72A0A0B4J1Y9 119 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 GPR6P46095 362 aaPredicted RBP10.63□□□□□ -0.71
SRP54-201ENST00000216774 HNRNPA3P51991 378 aaKnown RBP10.63□□□□□ -0.71
SRP54-201ENST00000216774 Q9H3A6 140 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 F11RQ9Y624 299 aaKnown RBP10.63□□□□□ -0.71
SRP54-201ENST00000216774 CUL9Q8IWT3 2517 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 IGLV1-47P01700 117 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 FAM87AP0C7U9 286 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 LINC00614P0C842 121 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 OR2D3Q8NGH3 330 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 NGBQ9NPG2 151 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 TMEM14CQ9P0S9 112 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 RPH3ALQ9UNE2 315 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 HIGD1AQ9Y241 93 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 ZFP30Q9Y2G7 519 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 LAMTOR2Q9Y2Q5 125 aa10.63□□□□□ -0.71
SRP54-201ENST00000216774 TRAV9-2A0A087WT02 112 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 IGHV2-26A0A0B4J1V2 119 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 C2orf70A6NJV1 201 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 KLK10O43240 276 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 EBLN2Q6P2I7 272 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
SRP54-201ENST00000216774 TCF24Q7RTU0 167 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 GTSF1Q8WW33 167 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 SGK494Q96LW2 274 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 OTORQ9NRC9 128 aa10.62□□□□□ -0.71
SRP54-201ENST00000216774 MRPS16Q9Y3D3 137 aaKnown RBP10.62□□□□□ -0.71
SRP54-201ENST00000216774 IGHV1-69-2A0A0G2JMI3 117 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 SHISA9B4DS77 424 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 TEX22C9J3V5 150 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 LCN12Q6JVE5 192 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 RBPMS2Q6ZRY4 209 aaKnown RBP10.61□□□□□ -0.71
SRP54-201ENST00000216774 PPP1R27Q86WC6 154 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 CHCHD1Q96BP2 118 aaKnown RBP10.61□□□□□ -0.71
SRP54-201ENST00000216774 DAZAP1Q96EP5 407 aaKnown RBP10.61□□□□□ -0.71
SRP54-201ENST00000216774 EP300Q09472 2414 aaPredicted RBP10.61□□□□□ -0.71
SRP54-201ENST00000216774 DMXL1Q9Y485 3027 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 IGHV1-3A0A0C4DH29 117 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 NPIPB6E9PJ23 425 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 NPSP0C0P6 89 aa10.61□□□□□ -0.71
SRP54-201ENST00000216774 RALYQ9UKM9 306 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 637.8 ms