RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 KALRNO60229 2985 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 TRBV6-6A0A0A6YYG2 114 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 TMEM210A6NLX4 147 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 CD177Q8N6Q3 437 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 ABHD17AQ96GS6 310 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 WDR83OSQ9Y284 106 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 C5orf30Q96GV9 206 aa12.28□□□□□ -0.44
SRRD-201ENST00000215917 A0A1W2PS18 150 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 IGKV3-15P01624 115 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 LMO1P25800 156 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 NBL1P41271 181 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 FAM27E3Q08E93 113 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 TBR1Q16650 682 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 LINC00305Q7Z4B0 112 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 MBNL3Q9NUK0 354 aaKnown RBP12.27□□□□□ -0.44
SRRD-201ENST00000215917 SPCS1Q9Y6A9 102 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 MYO9AB2RTY4 2548 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.27□□□□□ -0.44
SRRD-201ENST00000215917 GUSBP1Q15486 140 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 MSMPQ1L6U9 139 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 ZBTB34Q8NCN2 500 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 TNFRSF19Q9NS68 423 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 CALYQ9NYX4 217 aa12.27□□□□□ -0.44
SRRD-201ENST00000215917 RALYQ9UKM9 306 aaKnown RBP12.27□□□□□ -0.44
SRRD-201ENST00000215917 ADH4P08319 380 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 DNLZQ5SXM8 178 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 OR4F17Q8NGA8 305 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 PLSCR4Q9NRQ2 329 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 FAM215AQ9Y5M1 114 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 BSNQ9UPA5 3926 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 ZNF785A8K8V0 405 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 CEACAM4O75871 244 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 CKS2P33552 79 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 TWIST1Q15672 202 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 ZNF474Q6S9Z5 364 aaPredicted RBP12.27□□□□□ -0.45
SRRD-201ENST00000215917 WFDC12Q8WWY7 111 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 MGST2Q99735 147 aa12.27□□□□□ -0.45
SRRD-201ENST00000215917 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.45
SRRD-201ENST00000215917 NCOR2Q9Y618 2525 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 SRSF9Q13242 221 aaKnown RBP eCLIP12.26□□□□□ -0.45
SRRD-201ENST00000215917 VMA21Q3ZAQ7 101 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 COX19Q49B96 90 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 TMEM14EPQ6UXP3 125 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 GAGE12BA1L429 117 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 NPPCP23582 126 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 S100A4P26447 101 aaKnown RBP12.26□□□□□ -0.45
SRRD-201ENST00000215917 DUX4L9Q6RFH8 374 aaPredicted RBP12.26□□□□□ -0.45
SRRD-201ENST00000215917 OR1L8Q8NGR8 309 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 RNASEH2CQ8TDP1 164 aaKnown RBP12.26□□□□□ -0.45
SRRD-201ENST00000215917 PRNDQ9UKY0 176 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 IGHV3-49A0A0A0MS15 119 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 PPIFP30405 207 aaKnown RBP12.26□□□□□ -0.45
SRRD-201ENST00000215917 AAMDCQ9H7C9 122 aa12.26□□□□□ -0.45
SRRD-201ENST00000215917 IGLC2P0DOY2 106 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 IGLC3P0DOY3 106 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 FOXL1Q12952 345 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 Q6ZS92 163 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 ZNF502Q8TBZ5 544 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 TSKUQ8WUA8 353 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 SCNM1Q9BWG6 230 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 CACNA1AO00555 2505 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 A0A1W2PRE2 83 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 GPR183P32249 361 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 HBBP68871 147 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 UTF1Q5T230 341 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 FAM208BQ5VWN6 2430 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 TMEM136Q6ZRR5 245 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 FAM216BQ8N7L0 139 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 COX11Q9Y6N1 276 aa12.25□□□□□ -0.45
SRRD-201ENST00000215917 CRYABP02511 175 aaKnown RBP12.24□□□□□ -0.45
SRRD-201ENST00000215917 IGLL1P15814 213 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 COL25A1Q9BXS0 654 aaPredicted RBP12.24□□□□□ -0.45
SRRD-201ENST00000215917 GAL3ST2Q9H3Q3 398 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 TMEM160Q9NX00 188 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 RIGQ13278 110 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 NOTCH2Q04721 2471 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 TMEM97Q5BJF2 176 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 C1orf185Q5T7R7 199 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 IGF2-ASQ6U949 168 aa12.24□□□□□ -0.45
SRRD-201ENST00000215917 IGKV1D-17A0A075B6S4 117 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 FAM181BA6NEQ2 426 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 C15orf62A8K5M9 175 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 PEX7O00628 323 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 SCGB2A1O75556 95 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 STAG3L2P0CL84 134 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 STAG3L3P0CL85 134 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 NHP2Q9NX24 153 aaKnown RBP12.23□□□□□ -0.45
SRRD-201ENST00000215917 J3QW42 95 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 NBEAP1P0C6P0 100 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 SLAQ13239 276 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 PRSS57Q6UWY2 283 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 ZNF418Q8TF45 676 aaPredicted RBP12.23□□□□□ -0.45
SRRD-201ENST00000215917 SNRNP40Q96DI7 357 aaKnown RBP12.23□□□□□ -0.45
SRRD-201ENST00000215917 CST9LQ9H4G1 147 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 IGHV3-23P01764 117 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 PRR30Q53SZ7 412 aaPredicted RBP12.23□□□□□ -0.45
SRRD-201ENST00000215917 PERPQ96FX8 193 aa12.23□□□□□ -0.45
SRRD-201ENST00000215917 PPP1R14DQ9NXH3 145 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms