RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 FAM231DQ6ZW35 169 aa11.29□□□□□ -0.6
USH1C-201ENST00000005226 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
USH1C-201ENST00000005226 OR10X1Q8NGY0 326 aa11.29□□□□□ -0.6
USH1C-201ENST00000005226 WIPF2Q8TF74 440 aaPredicted RBP11.29□□□□□ -0.6
USH1C-201ENST00000005226 FAM87AP0C7U9 286 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 PDPNQ86YL7 162 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 RNASE8Q8TDE3 154 aaKnown RBP11.28□□□□□ -0.6
USH1C-201ENST00000005226 GTSF1Q8WW33 167 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 hDV102S1A0JD36 115 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
USH1C-201ENST00000005226 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
USH1C-201ENST00000005226 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
USH1C-201ENST00000005226 H0Y8G0 127 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 CRYABP02511 175 aaKnown RBP11.28□□□□□ -0.6
USH1C-201ENST00000005226 FAM169BQ8N8A8 192 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 OR5AN1Q8NGI8 311 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 OR1L4Q8NGR5 311 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
USH1C-201ENST00000005226 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
USH1C-201ENST00000005226 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 ZZEF1O43149 2961 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 IGFL2Q6UWQ7 119 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 LINC00312Q9Y6C7 94 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 TM4SF5O14894 197 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 HIST1H1EP10412 219 aaKnown RBP11.27□□□□□ -0.61
USH1C-201ENST00000005226 KLF5Q13887 457 aaPredicted RBP11.27□□□□□ -0.61
USH1C-201ENST00000005226 OR4F17Q8NGA8 305 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 ZNF835Q9Y2P0 537 aa11.27□□□□□ -0.61
USH1C-201ENST00000005226 IGLV2-23P01705 113 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 NBEAP1P0C6P0 100 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 CNTFRP26992 372 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 MYCNOSP40205 109 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 PCP4P48539 62 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 BPIFB3P59826 476 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 TMEM177Q53S58 311 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 DEFB124Q8NES8 71 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 TMEM167AQ8TBQ9 72 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 PMCHL2Q9BQD1 86 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 PIEZO2Q9H5I5 2752 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 ATMQ13315 3056 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 IGHV2-26A0A0B4J1V2 119 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 A0A1B0GXF2 115 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 M0R296 226 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 TNFSF4P23510 183 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 CD40P25942 277 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 CA7P43166 264 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 FAM120AOSQ5T036 256 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 CCL17Q92583 94 aa11.26□□□□□ -0.61
USH1C-201ENST00000005226 OR2J3O76001 311 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 ATP5IP56385 69 aaPredicted RBP11.25□□□□□ -0.61
USH1C-201ENST00000005226 OR4C13Q8NGP0 309 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 OR4C46A6NHA9 309 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 CIARTQ8N365 385 aaPredicted RBP11.25□□□□□ -0.61
USH1C-201ENST00000005226 ZNF596Q8TC21 504 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 GPR82Q96P67 336 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 MRPS16Q9Y3D3 137 aaKnown RBP11.25□□□□□ -0.61
USH1C-201ENST00000005226 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
USH1C-201ENST00000005226 K7EM74 188 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 CSN3P07498 182 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 HBBP68871 147 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 MRGPRG-AS1Q2M3A8 158 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 TMEM70Q9BUB7 260 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 RPP21Q9H633 154 aaKnown RBP11.24□□□□□ -0.61
USH1C-201ENST00000005226 COX11Q9Y6N1 276 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 TTC28Q96AY4 2481 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 IGHV1-24A0A0C4DH33 117 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 MPV17L2Q567V2 206 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 TEX36Q5VZQ5 186 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 THAP8Q8NA92 274 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 ORAOV1Q8WV07 137 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 ASCL3Q9NQ33 180 aa11.24□□□□□ -0.61
USH1C-201ENST00000005226 IGLC7A0M8Q6 106 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 P01737 135 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
USH1C-201ENST00000005226 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 EXOC3-AS1Q8N2X6 119 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 PERPQ96FX8 193 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 Q9H3A6 140 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 AKAP13Q12802 2813 aa11.23□□□□□ -0.61
USH1C-201ENST00000005226 UBE2V1Q13404 147 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 FOXE3Q13461 319 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 ZADH2Q8N4Q0 377 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 ZNF738Q8NE65 137 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 SH3BGRL2Q9UJC5 107 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 WASHC3Q9Y3C0 194 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 MUC15Q8N387 334 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 DAZAP1Q96EP5 407 aaKnown RBP11.22□□□□□ -0.61
USH1C-201ENST00000005226 CTSZQ9UBR2 303 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
USH1C-201ENST00000005226 LOC105371242A0A075B767 164 aa11.21□□□□□ -0.61
USH1C-201ENST00000005226 A8MWL6 223 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms