RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 SHISA9B4DS77 424 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 IGKV1-5P01602 117 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 NTF4P34130 210 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 DEFB113Q30KQ7 82 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 LY6G6FQ5SQ64 297 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 KLK15Q9H2R5 256 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 DCAF16Q9NXF7 216 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 DIRC3C9JPN6 131 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 ERVK11-1P61568 191 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 NMSQ5H8A3 153 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 PSG8Q9UQ74 426 aa8.43□□□□□ -1.06
NIPAL3-201ENST00000003912 A0A1W2PNU3 283 aaPredicted RBP8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 SOD3P08294 240 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 C9orf139Q6ZV77 190 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 COPS9Q8WXC6 57 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 USF3Q68DE3 2245 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 TRGC2P03986 189 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 SMIM6P0DI80 62 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 GRNP28799 593 aaKnown RBP8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 GNG5P63218 68 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 CIRBPQ14011 172 aaKnown RBP8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 LHFPL4Q7Z7J7 247 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 IL36BQ9NZH7 164 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 MYLKQ15746 1914 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 OR11H12B2RN74 326 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 DKK1O94907 266 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 NMUP48645 174 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF581Q9P0T4 197 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 TRGV4A0A0C4DH28 118 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 C5orf52A6NGY3 159 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 TCF21O43680 179 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 CCL20P78556 96 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 C1QTNF4Q9BXJ3 329 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 SLC25A39Q9BZJ4 359 aaPredicted RBP8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 DKK4Q9UBT3 224 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 PKDREJQ9NTG1 2253 aa8.42□□□□□ -1.06
NIPAL3-201ENST00000003912 RPL15P61313 204 aaKnown RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 RNF138Q8WVD3 245 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 PRELID3AQ96N28 172 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 KAAG1Q9UBP8 84 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 LGALS3P17931 250 aaKnown RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 DTX2Q86UW9 622 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 FAM110DQ8TAY7 271 aaPredicted RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 VN1R17PQ8TDU5 208 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 GGTLC1Q9BX51 225 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 TGIF2-C20orf24A0A0A6YYL0 155 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 ZNF98A6NK75 572 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 SUPT4H1P63272 117 aaKnown RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 C21orf62-AS1Q17RA5 79 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 TMEM136Q6ZRR5 245 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 WDR86Q86TI4 376 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 HS3ST6Q96QI5 342 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 DAZ1Q9NQZ3 744 aaKnown RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 H0YIZ8 118 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 Q71RC1 249 aaPredicted RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 SPOCK3Q9BQ16 436 aa8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
NIPAL3-201ENST00000003912 IGKV1-16P04430 117 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 CFPP27918 469 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 CACNG7P62955 275 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 C5orf24Q7Z6I8 188 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 BIVMQ86UB2 503 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 C2orf88Q9BSF0 95 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 C2orf16Q68DN1 1984 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 FBLN7Q53RD9 439 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 HSPB9Q9BQS6 159 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 ATP6V0E1O15342 81 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 PRSS2P07478 247 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 KIAA1644Q3SXP7 199 aa8.4□□□□□ -1.06
NIPAL3-201ENST00000003912 PMS2P5A8MQ11 134 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 TOMM40O96008 361 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 ZNF688P0C7X2 276 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 RHPN1-AS1Q9BWJ2 59 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 KIF26AQ9ULI4 1882 aaPredicted RBP8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 ADORA2A-AS1P86434 159 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 MEIG1Q5JSS6 88 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 TMEM14EPQ6UXP3 125 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 ZNF833PQ6ZTB9 187 aa8.4□□□□□ -1.07
NIPAL3-201ENST00000003912 LINC01619G3V211 115 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 IGHV2-5P01817 119 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 PHF3Q92576 2039 aaKnown RBP8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 TRAV9-1A0A075B6T8 112 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 MUC21A0A0G2JKD1 596 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 MUC21A0A140T8X8 626 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 A6NDN8 102 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 SLC17A3O00476 420 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 SCRT1Q9BWW7 348 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 PRO1933Q9H354 126 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 SYNJ2BPP57105 145 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 FER1L5A0AVI2 2057 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 TMEM238LA0A1B0GVL6 79 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 A6NJY4 79 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 OVOL3O00110 214 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 NDPQ00604 133 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 PMCHL1Q16048 86 aa8.39□□□□□ -1.07
NIPAL3-201ENST00000003912 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms