RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ubald2Q8BQH4 164 aa9.56□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gm5108J3QP01 101 aa9.56□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ndufb11O09111 151 aa9.56□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Pitx3O35160 302 aa9.56□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Prss3Q792Z0 246 aaKnown RBP9.56□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr1440Q8VFV4 315 aa9.56□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr978E9Q985 311 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Cd5P13379 494 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Evi2aP20934 223 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ceacam12Q3UKP4 300 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Psg26Q4KL65 475 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Spcs3Q6ZWQ7 180 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Aadacl4B1AVU5 407 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Saa2P05367 122 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 P18530 117 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Lrfn4Q80XU8 636 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Fam53bQ8BGR5 422 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Fam174bQ8K064 153 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr1262Q8VGN2 304 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr206Q8VGP9 306 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Rfpl4aQ8VH31 287 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 BmfQ91ZE9 185 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Anapc16Q9CPV2 110 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Kcnmb2Q9CZM9 235 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Suv39h2Q9EQQ0 477 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Rnase4Q9JJH1 148 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Tmub1Q9JMG3 245 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 BsgP18572 389 aaKnown RBP9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 1700009N14RikQ14AA6 216 aaKnown RBP9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Cks1brtQ3UNC9 96 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Zdhhc23Q5Y5T3 425 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Fam222bQ6P539 562 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Bmpr1bP36898 502 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Nfam1Q8R4V1 264 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ube2v2Q9D2M8 145 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Lysmd2Q9D7V2 215 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr959Q9EQ86 311 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Igkv1-133A0A0B4J1H8 120 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Lbhd2G3UW55 114 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 D430019H16RikJ3QPM6 83 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 P01667 111 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Pate2Q3UW31 111 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Lrrc25Q8K1T1 297 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gtf3aQ8VHT7 364 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Stard4Q99JV5 224 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mrpl33Q9CQP0 65 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Susd3Q9D176 269 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gpa33Q9JKA5 319 aa9.55□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Tmem116A0A0G2JGD3 401 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Zfp942B8JJA7 486 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Q0VG62 139 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr1026Q7TR90 307 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr91Q7TRL3 312 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mettl27Q8BGM4 238 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Cbln2Q8BGU2 224 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Rbpms2Q8VC52 206 aaKnown RBP9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 2900055J20RikQ9D6G3 140 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mrpl30Q9D7N6 160 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mbnl1Q9JKP5 341 aaKnown RBP9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Adam6aB2RSY5 754 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr92L7N475 312 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Zfp772Q3UQL6 416 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mex3bQ69Z36 601 aaKnown RBP9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Zfp455Q7M6X9 461 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Rnf182Q8C432 247 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Dolpp1Q9JMF7 238 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Npc2Q9Z0J0 149 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gm15140A2BEE3 237 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Fabp4P04117 132 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr1437Q7TQR7 312 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 NgfrQ9Z0W1 417 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Fam53aE9PV82 402 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr1537P34983 314 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 RanP62827 216 aaKnown RBP9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mob3bQ8VE04 216 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr824Q8VFU4 315 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gm39566A0A1B0GT45 1251 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 D930048N14RikA2AA67 225 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Zfp456B2RUK9 458 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gm15440D3Z3P4 90 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 P01661 131 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 P01662 111 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 P01663 111 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 S100a4P07091 101 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mmp9P41245 730 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr875Q7TRE5 310 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 RflnaQ7TS73 204 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ercc8Q8CFD5 397 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ptrh2Q8R2Y8 181 aaKnown RBP9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Cthrc1Q9D1D6 245 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Snrnp200Q6P4T2 2136 aaKnown RBP9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ighv1-13A0A075B5I0 98 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Olfr1220F7BL62 311 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Vmn1r78K7N608 313 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 SrstQ06666 185 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 V1rd19Q3KNP5 305 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Mad2l1bpQ9DCX1 276 aa9.54□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Ldlrad3A2AR95 345 aa9.53□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Gm4787B2RUD9 748 aa9.53□□□□□ -0.88
Scn8a-203ENSMUST00000108908 Rpl30P62889 115 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 57.8 ms