RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Rph3alQ768S4 302 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Henmt1Q8CAE2 395 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Xrcc3Q9CXE6 349 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Rnase6Q9D244 153 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Trbv29A0A0G2LB96 114 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr573-ps1A0A1B0GRU2 297 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tnfsf10P50592 291 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Thbs3Q05895 956 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm813Q3UWK9 176 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Rtl6Q505G4 243 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm20816Q5FWD4 227 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Klk13Q8CGR6 276 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 B4galt7Q8R087 327 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Map1lc3bQ9CQV6 125 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Ndufb10Q9DCS9 176 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Igkv6-14A0A140T8P1 115 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr739E9Q1P0 309 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Sox15P43267 231 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Lrrc30Q3UV48 300 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm21943Q5FWD5 227 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Zfp85Q7TMC9 473 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 YbeyQ8CAV0 164 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gltpd2Q8K0R6 321 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Prodh2Q8VCZ9 456 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr360Q8VFP3 317 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Bcdin3dQ91YP1 285 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Foxj2Q9ES18 565 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 NmuQ9QXK8 174 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr221B2RVX8 311 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm10666K7N6B8 321 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Vmn1r121K7N6J4 314 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 PkibQ04758 92 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 H2-DMb2Q31099 261 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Q80W69 301 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tusc5Q8C838 173 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Rab4bQ91ZR1 213 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm9964E9Q9S5 144 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 DdtO35215 118 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Reg2Q08731 173 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Sf3a2Q62203 475 aaKnown RBP13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Sp110Q8BVK9 445 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Mrpl21Q9D1N9 209 aaKnown RBP13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Fbxo24Q9D417 589 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 PyyQ9EPS2 98 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Cst10Q9JM84 148 aa13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Eif3iQ9QZD9 325 aaKnown RBP13.75□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr1396Q7TQS8 315 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Nadk2Q8C5H8 452 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tmem212Q8C6V3 187 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Mrps18cQ8R2L5 143 aaKnown RBP13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr362Q8VGV7 317 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tspan2Q922J6 221 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Msmo1Q9CRA4 293 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tusc2Q9WVF8 110 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Rplp1P47955 114 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Ube2g2P60605 165 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 MpgQ04841 333 aaKnown RBP13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 H2-M10.6Q85ZW5 330 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Prss35Q8C0F9 409 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Vmn1r225Q8R2A5 298 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Mrpl27Q99N92 148 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 ApooQ9DCZ4 198 aa13.74□□□□□ -0.21
Trim28-201ENSMUST00000005705 Fcgr4A0A0B4J1G0 249 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr465-ps1A0A0U1RPZ4 315 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Trp53rkaQ5U452 244 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr509Q8VF20 321 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr1170Q8VFG1 316 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tp53rkQ99PW4 244 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Clec4eQ9R0Q8 214 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Chst4Q9R1I1 388 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Col6a4A2AX52 2309 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 MsmpB1AWI6 139 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Esp8F7AMQ8 149 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm5108J3QP01 101 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr907Q7TRC7 310 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Aph1aQ8BVF7 265 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Vmn1r233Q8R294 319 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 FetubQ9QXC1 388 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Fbln5Q9WVH9 448 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Sptbn4E9PX29 2561 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Cd8bP10300 213 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tmem106bQ80X71 275 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Mettl21AQ9CQL0 218 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr1264Q9R0K2 308 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Nav2E9Q842 2432 aa13.73□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm21834J3QN05 151 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gdf1P20863 357 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Hist1h3aP68433 136 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Fam160a2Q3U2I3 975 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Trat1Q3UU67 187 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Ubald1Q6P3B2 176 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Slc46a1Q6PEM8 459 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr715Q8VG49 315 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Scgb1b27Q91WB5 92 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr116Q923Q6 321 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Tmem170aQ9D342 144 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 H3f3cP02301 136 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 FmodP50608 376 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 AesP63002 197 aa13.72□□□□□ -0.21
Trim28-201ENSMUST00000005705 Vkorc1l1Q6TEK5 176 aa13.72□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms