RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 RCC1LQ96I51 464 aaKnown RBP10.28□□□□□ -0.76
PHGDH-221ENST00000641573 PRDM13Q9H4Q3 707 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 TNFRSF19Q9NS68 423 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 SLC39A9Q9NUM3 307 aa10.28□□□□□ -0.76
PHGDH-221ENST00000641573 IGKV1D-37A0A075B6S9 117 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 A0A1B0GV50 99 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 ZFP92A6NM28 416 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 G3V318 75 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 LINC00869P0C866 280 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 HIST1H1BP16401 226 aaKnown RBP10.27□□□□□ -0.77
PHGDH-221ENST00000641573 CRIP2P52943 208 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-221ENST00000641573 BLCAPP62952 87 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 PRR20EP86478 221 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 PRR20CP86479 221 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 PRR20DP86480 221 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 PRR20BP86481 221 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 PRR20AP86496 221 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 AKIRIN2Q53H80 203 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 GCSAMLQ5JQS6 135 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 SPSB3Q6PJ21 355 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 SSX7Q7RTT5 188 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 SLC35E3Q7Z769 313 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 RPP25LQ8N5L8 163 aaKnown RBP10.27□□□□□ -0.77
PHGDH-221ENST00000641573 TMEM116Q8NCL8 245 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 BPIFCQ8NFQ6 507 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 MBD3L1Q8WWY6 194 aa10.27□□□□□ -0.77
PHGDH-221ENST00000641573 ACTR3CQ9C0K3 210 aaPredicted RBP10.27□□□□□ -0.77
PHGDH-221ENST00000641573 TRAV41A0A0B4J266 112 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 CTXND1A0A1B0GTU2 59 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 TCRBV4S1A1TA0A5B7 111 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 HOXA3O43365 443 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-221ENST00000641573 OR2J3O76001 311 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 NDUFB8O95169 186 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 IGHG2P01859 326 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 HBE1P02100 147 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 S100A1P23297 94 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
PHGDH-221ENST00000641573 CCL20P78556 96 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 LCN15Q6UWW0 184 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 EIF4E3Q8N5X7 224 aaKnown RBP10.26□□□□□ -0.77
PHGDH-221ENST00000641573 COMMD1Q8N668 190 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 TRGV9Q99603 122 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 SLC25A22Q9H936 323 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 THYN1Q9P016 225 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 VPREB3Q9UKI3 123 aa10.26□□□□□ -0.77
PHGDH-221ENST00000641573 TRAV1-1A0A0B4J248 108 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 MAP1LC3B2A6NCE7 125 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 SEC14L6B5MCN3 397 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 EIF3GO75821 320 aaKnown RBP eCLIP10.25□□□□□ -0.77
PHGDH-221ENST00000641573 IGF1P05019 195 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-221ENST00000641573 DEFA6Q01524 100 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 ZNF90Q03938 601 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 KLK9Q2XQG4 91 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 C19orf54Q5BKX5 351 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 Q6ZS46 218 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 MAP1LC3BQ9GZQ8 125 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 ZNF355PQ9NSJ1 428 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 LINC00527Q9UJ94 153 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 FBXL7Q9UJT9 491 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 KLK9Q9UKQ9 250 aa10.25□□□□□ -0.77
PHGDH-221ENST00000641573 I3L521 148 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 CLN5O75503 358 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 FGF8P55075 233 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-221ENST00000641573 MFAP4P55083 255 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 SELENOTP62341 195 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 DEFA5Q01523 94 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 UQCC3Q6UW78 93 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 RAB24Q969Q5 203 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 S4R3C0 116 aa10.24□□□□□ -0.77
PHGDH-221ENST00000641573 A0A1W2PPV4 95 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 ANKRD34BA5PLL1 514 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 AP4M1O00189 453 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 HMGB3O15347 200 aaKnown RBP10.23□□□□□ -0.77
PHGDH-221ENST00000641573 IGLC1P0CG04 106 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 NPBWR1P48145 328 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 RHOBP62745 196 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 RHOGP84095 191 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 SRSF3P84103 164 aaKnown RBP10.23□□□□□ -0.77
PHGDH-221ENST00000641573 SCGB2A2Q13296 93 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 TIGITQ495A1 244 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 PRR31Q5SQ13 230 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 VN1R17PQ8TDU5 208 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 FAM210AQ96ND0 272 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 C21orf62Q9NYP8 219 aa10.23□□□□□ -0.77
PHGDH-221ENST00000641573 TRBV9A0A0B4J1U6 114 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 GUK1Q16774 197 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 Q56UQ5 140 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 SPATA31B1PQ5VZV4 182 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 TMEM86BQ8N661 226 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 NECAP1Q8NC96 275 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 NOL4LQ96MY1 436 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-221ENST00000641573 MS4A10Q96PG2 267 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 TMEM231Q9H6L2 316 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 TREM1Q9NP99 234 aa10.22□□□□□ -0.77
PHGDH-221ENST00000641573 TRAV30A0A087WSZ9 112 aa10.21□□□□□ -0.77
PHGDH-221ENST00000641573 PSMB11A5LHX3 300 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms