RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 NEUROG1Q92886 237 aa4.72□□□□□ -1.65
SCARB2-218ENST00000639715 PLPPR2Q96GM1 343 aa4.72□□□□□ -1.65
SCARB2-218ENST00000639715 SGK494Q96LW2 274 aa4.72□□□□□ -1.65
SCARB2-218ENST00000639715 RABAC1Q9UI14 185 aa4.72□□□□□ -1.65
SCARB2-218ENST00000639715 FZR1Q9UM11 496 aa4.72□□□□□ -1.65
SCARB2-218ENST00000639715 LSM4Q9Y4Z0 139 aaKnown RBP4.72□□□□□ -1.65
SCARB2-218ENST00000639715 DOPEY2Q9Y3R5 2298 aa4.72□□□□□ -1.65
SCARB2-218ENST00000639715 KIAA1549LQ6ZVL6 1849 aa4.71□□□□□ -1.65
SCARB2-218ENST00000639715 PRSS29PA6NIE9 313 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 GATA3P23771 443 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 ATP5IP56385 69 aaPredicted RBP4.71□□□□□ -1.66
SCARB2-218ENST00000639715 SFTA2Q6UW10 78 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 GGNQ86UU5 652 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 GCSAMQ8N6F7 178 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 OR9G4Q8NGQ1 327 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 OR1L4Q8NGR5 311 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 OR13C6PQ8NH95 151 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 PGPEP1Q9NXJ5 209 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 WNT2P09544 360 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 MPV17P39210 176 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 CX3CL1P78423 397 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 TMEM30BQ3MIR4 351 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 AMTNQ6UX39 209 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 RNF144BQ7Z419 303 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 C10orf126Q8N4M7 172 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 WDR31Q8NA23 367 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 KLF14Q8TD94 323 aaPredicted RBP4.71□□□□□ -1.66
SCARB2-218ENST00000639715 GPR82Q96P67 336 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 HES7Q9BYE0 225 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 ARHGAP21Q5T5U3 1957 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 IGKV1-27A0A075B6S5 117 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 SAA2-SAA4A0A096LPE2 208 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 TRAV8-2A0A0B4J237 113 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 FAM90A27PA6NNH2 459 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 AGFG2O95081 481 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 PRSS1P07477 247 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 COX8AP10176 69 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 SPINK2P20155 84 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 VDAC2P45880 294 aaPredicted RBP4.71□□□□□ -1.66
SCARB2-218ENST00000639715 Q6ZT83 130 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 MOGAT3Q86VF5 341 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 HIST1H4GQ99525 98 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 C20orf78Q9BR46 151 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 SFXN3Q9BWM7 321 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 TNFRSF19Q9NS68 423 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 ZNF355PQ9NSJ1 428 aa4.71□□□□□ -1.66
SCARB2-218ENST00000639715 IZUMO1RA6ND01 250 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 A8MWL6 223 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 TMPRSS2O15393 492 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 IGHV3-7P01780 117 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 CENPVQ7Z7K6 275 aaPredicted RBP4.7□□□□□ -1.66
SCARB2-218ENST00000639715 C1orf162Q8NEQ5 155 aaPredicted RBP4.7□□□□□ -1.66
SCARB2-218ENST00000639715 RAX2Q96IS3 184 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 SPANXA1Q9NS26 97 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 AP5S1Q9NUS5 200 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 TRBV6-6A0A0A6YYG2 114 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 IGKV1D-13A0A0B4J2D9 117 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 A4D1N5 150 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 IGKV1-13P0DP09 117 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 FCGR2BP31994 310 aaPredicted RBP4.7□□□□□ -1.66
SCARB2-218ENST00000639715 PSMB2P49721 201 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 COLCA1Q6ZS62 124 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 PRELID3AQ96N28 172 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 DEPPQ9NTK1 212 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 SHANK1Q9Y566 2161 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 KIF26AQ9ULI4 1882 aaPredicted RBP4.7□□□□□ -1.66
SCARB2-218ENST00000639715 WISP1O95388 367 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 MT-ATP8P03928 68 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 IL4P05112 153 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 FRMD6-AS1P0C7T7 363 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 VWC2Q2TAL6 325 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 C3orf56Q8N813 242 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 RNF138Q8WVD3 245 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 NEU4Q8WWR8 484 aaPredicted RBP4.7□□□□□ -1.66
SCARB2-218ENST00000639715 TIMD4Q96H15 378 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 IL36RNQ9UBH0 155 aa4.7□□□□□ -1.66
SCARB2-218ENST00000639715 C5orf63A6NC05 138 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 IFITM1P13164 125 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 B3GALT5-AS1P59052 145 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 TFF3Q07654 80 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 LYPD6Q86Y78 171 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 TTC9CQ8N5M4 171 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 DEFB124Q8NES8 71 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 LOC389332A0A1B0GUA5 103 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 IQCF6A8MYZ5 107 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 C12orf77C9JDV5 145 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 TGFAP01135 160 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 IGLV3-1P01715 115 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 PRTN3P24158 256 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 HSPE1P61604 102 aaKnown RBP4.69□□□□□ -1.66
SCARB2-218ENST00000639715 ARL16Q0P5N6 197 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 NMSQ5H8A3 153 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 ZNF826PQ6ZT77 177 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 OR1L8Q8NGR8 309 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 FGFBP3Q8TAT2 258 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 JMJD8Q96S16 334 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 NPCDR1Q9BY65 106 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 DYSFO75923 2080 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 TRAV24A0A0B4J272 114 aa4.69□□□□□ -1.66
SCARB2-218ENST00000639715 MLNRO43193 412 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms