RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 C4orf46Q504U0 113 aa9.76□□□□□ -0.85
SYNGAP1-224ENST00000637721 TMEM217Q8N7C4 229 aa9.76□□□□□ -0.85
SYNGAP1-224ENST00000637721 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
SYNGAP1-224ENST00000637721 OR52E5Q8NH55 327 aa9.76□□□□□ -0.85
SYNGAP1-224ENST00000637721 PDCD10Q9BUL8 212 aa9.76□□□□□ -0.85
SYNGAP1-224ENST00000637721 RHPN1-AS1Q9BWJ2 59 aa9.76□□□□□ -0.85
SYNGAP1-224ENST00000637721 CHEK1O14757 476 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 SCGB2A1O75556 95 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 YIF1AO95070 293 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 SULT1A3P0DMM9 295 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 SULT1A4P0DMN0 295 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 SNCAP37840 140 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 PAFAH1B2P68402 229 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 COQ8AQ8NI60 647 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 MITD1Q8WV92 249 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 RNF183Q96D59 192 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 UBQLN2Q9UHD9 624 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 TMED3Q9Y3Q3 217 aa9.75□□□□□ -0.85
SYNGAP1-224ENST00000637721 A0A1B0GU03 582 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 NUPR2A6NF83 97 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 PITX3O75364 302 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 SLC25A6P12236 298 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 SPCS3P61009 180 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 SMCO1Q147U7 214 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 SPINK9Q5DT21 86 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 PINX1Q96BK5 328 aaKnown RBP9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 RNF2Q99496 336 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 SEC22CQ9BRL7 303 aa9.74□□□□□ -0.85
SYNGAP1-224ENST00000637721 ZNF207O43670 478 aaKnown RBP9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 IFNA17P01571 189 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 IL5P05113 134 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 DEFB135Q30KP9 77 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 GGNBP1Q5YKI7 109 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 PVRIGQ6DKI7 326 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 ZNF600Q6ZNG1 722 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 ZNF431Q8TF32 576 aaPredicted RBP9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 MARVELD1Q9BSK0 173 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 TMEM231Q9H6L2 316 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 MAP6D1Q9H9H5 199 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 ENY2Q9NPA8 101 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 CACFD1Q9UGQ2 172 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 DNAH10Q8IVF4 4471 aa9.73□□□□□ -0.85
SYNGAP1-224ENST00000637721 DNAH6Q9C0G6 4158 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 IGHV3OR16-8A0A075B7F1 116 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 TRAV2A0A0B4J234 112 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 A0A0J9YWU9 116 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 ADAP1O75689 374 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 PTTG1O95997 202 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 HOXB5P09067 269 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 HOXA1P49639 335 aaPredicted RBP9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 FAM90A2PQ658T7 463 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 TOMM20LQ6UXN7 152 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 GATAD1Q8WUU5 269 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 ZNF414Q96IQ9 312 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 VSIRQ9H7M9 311 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 HSPB7Q9UBY9 170 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 VPS13DQ5THJ4 4388 aa9.72□□□□□ -0.85
SYNGAP1-224ENST00000637721 A0A1W2PS18 150 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 CXorf65A6NEN9 183 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 MPTX1A8MV57 137 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 INMT-MINDY4F8WBC2 141 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 DFFBO76075 338 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 TMEM50AO95807 157 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 BSXQ3C1V8 233 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 CSTL1Q9H114 145 aa9.71□□□□□ -0.86
SYNGAP1-224ENST00000637721 TRAV30A0A087WSZ9 112 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 FAM90A26D6RGX4 464 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 PRAF2O60831 178 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 CLN5O75503 358 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 NXPH3O95157 252 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 RPL35AP18077 110 aaKnown RBP9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 TCF24Q7RTU0 167 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 C12orf45Q8N5I9 185 aaPredicted RBP9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 OR4X1Q8NH49 305 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 OR1S1Q8NH92 325 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 KLK5Q9Y337 293 aaPredicted RBP9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 PUS1Q9Y606 427 aaKnown RBP eCLIP9.7□□□□□ -0.86
SYNGAP1-224ENST00000637721 RPS10-NUDT3A0A1W2PQS6 291 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 CEBPZOSA8MTT3 80 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 SNRPGP15A8MWD9 76 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 DNASE2O00115 360 aaPredicted RBP9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 IFNA21P01568 189 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 IGHV3-48P01763 117 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 OPRK1P41145 380 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 HTR2BP41595 481 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 APRG1Q8IVJ8 170 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 OR4D5Q8NGN0 318 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 NARS2Q96I59 477 aaKnown RBP9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 RBKSQ9H477 322 aa9.69□□□□□ -0.86
SYNGAP1-224ENST00000637721 IGHV3-49A0A0A0MS15 119 aa9.68□□□□□ -0.86
SYNGAP1-224ENST00000637721 NPPCP23582 126 aa9.68□□□□□ -0.86
SYNGAP1-224ENST00000637721 TFPI2P48307 235 aa9.68□□□□□ -0.86
SYNGAP1-224ENST00000637721 PMS2P11Q13670 270 aa9.68□□□□□ -0.86
SYNGAP1-224ENST00000637721 CEMP1Q6PRD7 247 aaPredicted RBP9.68□□□□□ -0.86
SYNGAP1-224ENST00000637721 DTD1Q8TEA8 209 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms