RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 LINC00305Q7Z4B0 112 aa12.19□□□□□ -0.46
SCN8A-214ENST00000637709 OCC1Q8TAD7 63 aa12.19□□□□□ -0.46
SCN8A-214ENST00000637709 BLNKQ8WV28 456 aa12.19□□□□□ -0.46
SCN8A-214ENST00000637709 DNAJC4Q9NNZ3 241 aa12.19□□□□□ -0.46
SCN8A-214ENST00000637709 B4DEV8 164 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 FNDC10F2Z333 226 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 TOX4O94842 621 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 UBE2L3P68036 154 aaKnown RBP12.18□□□□□ -0.46
SCN8A-214ENST00000637709 FXYD3Q14802 87 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 C10orf113Q5VZT2 155 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 FAM167A-AS1Q96KT0 104 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 TECRQ9NZ01 308 aaKnown RBP12.18□□□□□ -0.46
SCN8A-214ENST00000637709 M0R1W7 72 aa12.18□□□□□ -0.46
SCN8A-214ENST00000637709 F11RQ9Y624 299 aaKnown RBP12.18□□□□□ -0.46
SCN8A-214ENST00000637709 K7EN84 100 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 UBR5O95071 2799 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-214ENST00000637709 NDUFA6P56556 154 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 LMO4P61968 165 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 GFI1BQ5VTD9 330 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 NANPQ8TBE9 248 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 PRELID1Q9Y255 219 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 INS-IGF2F8WCM5 200 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 SLC17A3O00476 420 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 C1QL4Q86Z23 238 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 RPH3ALQ9UNE2 315 aa12.17□□□□□ -0.46
SCN8A-214ENST00000637709 SOX21Q9Y651 276 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-214ENST00000637709 A1L4Q6 167 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 C5orf52A6NGY3 159 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 CLN5O75503 358 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 OR1P1Q8NH06 330 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 FRZBQ92765 325 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 SIRPDQ9H106 197 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 TRAV34A0A0B4J273 112 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 CXorf65A6NEN9 183 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 F6UZH7 168 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 CEACAM3P40198 252 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 LYZP61626 148 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 PAX2Q02962 417 aa12.16□□□□□ -0.46
SCN8A-214ENST00000637709 BCL6BQ8N143 479 aaPredicted RBP12.16□□□□□ -0.46
SCN8A-214ENST00000637709 IGHV2-70DA0A0C4DH43 119 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 MAS1LP35410 378 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 SAA4P35542 130 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
SCN8A-214ENST00000637709 GNG5P63218 68 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 TMEM249Q2WGJ8 235 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 TIGITQ495A1 244 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
SCN8A-214ENST00000637709 BRD3OSQ6XYD6 125 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 PERPQ96FX8 193 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 CCL19Q99731 98 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 IGHV3OR16-8A0A075B7F1 116 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 PFN1P07737 140 aaKnown RBP12.15□□□□□ -0.46
SCN8A-214ENST00000637709 CX3CL1P78423 397 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 PQLC2Q6ZP29 291 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 PIP4P2Q8N4L2 257 aa12.15□□□□□ -0.46
SCN8A-214ENST00000637709 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 IGHV4-61A0A0C4DH41 118 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 PSG1P11464 419 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 ATP5IP56385 69 aaPredicted RBP12.14□□□□□ -0.47
SCN8A-214ENST00000637709 C5orf64Q2M2E5 130 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 CENPWQ5EE01 88 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 MALSU1Q96EH3 234 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 PAXXQ9BUH6 204 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 CRYGCP07315 174 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 TMEM11P17152 192 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 SFRP2Q96HF1 295 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 OR5B12Q96R08 314 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 TMEM242Q9NWH2 141 aa12.14□□□□□ -0.47
SCN8A-214ENST00000637709 I3L2K1 104 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 OVOL3O00110 214 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 SPINK4O60575 86 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 FRMD6-AS1P0C7T7 363 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 TAS2R45P59539 299 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 TMEM219Q86XT9 240 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 LINC00518Q8N0U6 118 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 RNASE7Q9H1E1 156 aaKnown RBP12.13□□□□□ -0.47
SCN8A-214ENST00000637709 MXRA5Q9NR99 2828 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 OR51M1Q9H341 326 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
SCN8A-214ENST00000637709 HELTA6NFD8 242 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 LINC01548A6NM66 108 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 K7EIM0 57 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 TMEM116Q8NCL8 245 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 OR2T10Q8NGZ9 312 aa12.12□□□□□ -0.47
SCN8A-214ENST00000637709 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms