RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 S4R3C0 116 aa11.94□□□□□ -0.5
CTSD-211ENST00000637387 IGLC1P0CG04 106 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 B2MP61769 119 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 BLOC1S1P78537 153 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 ZNF90Q03938 601 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 SCGB2A2Q13296 93 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 SPSB3Q6PJ21 355 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 DPPA3Q6W0C5 159 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 TMEM86BQ8N661 226 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 ZNF709Q8N972 641 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 ZNF702PQ9H963 129 aa11.93□□□□□ -0.5
CTSD-211ENST00000637387 TCRBV4S1A1TA0A5B7 111 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 PSMB11A5LHX3 300 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 DNAJC9-AS1A6NH13 148 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 AP4M1O00189 453 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 EIF3GO75821 320 aaKnown RBP eCLIP11.92□□□□□ -0.5
CTSD-211ENST00000637387 ZNF616Q08AN1 781 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 CYP2G1PQ6ZSU1 146 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 COMMD7Q86VX2 200 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 BPIFCQ8NFQ6 507 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 TRGV9Q99603 122 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 KCNIP2Q9NS61 270 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 SLC39A9Q9NUM3 307 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 CLN5O75503 358 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 TSPAN15O95858 294 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 HIST1H1BP16401 226 aaKnown RBP11.92□□□□□ -0.5
CTSD-211ENST00000637387 M6PRP20645 277 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 SRSF2Q01130 221 aaKnown RBP11.92□□□□□ -0.5
CTSD-211ENST00000637387 ZNF414Q96IQ9 312 aa11.92□□□□□ -0.5
CTSD-211ENST00000637387 ZFP92A6NM28 416 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 SEC14L6B5MCN3 397 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 BRI3O95415 125 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 IGKV1-17P01599 117 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 RHOGP84095 191 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 RAB31Q13636 194 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
CTSD-211ENST00000637387 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 OR10G9Q8NGN4 311 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 OR10G7Q8NGN6 311 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 HRH4Q9H3N8 390 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 SLC25A22Q9H936 323 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 FBXL7Q9UJT9 491 aa11.91□□□□□ -0.5
CTSD-211ENST00000637387 CYB5BO43169 146 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 TSPAN9O75954 239 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 IGLV1-40P01703 118 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 MBP02144 154 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 ACOT6Q3I5F7 207 aaPredicted RBP11.9□□□□□ -0.5
CTSD-211ENST00000637387 Q8N2B8 174 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 MBD3L1Q8WWY6 194 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 CCDC140Q96MF4 163 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 C19orf24Q9BVV8 132 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 C21orf62Q9NYP8 219 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 THYN1Q9P016 225 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 FBN3Q75N90 2809 aa11.9□□□□□ -0.5
CTSD-211ENST00000637387 ANK2Q01484 3957 aa11.9□□□□□ -0.51
CTSD-211ENST00000637387 IGHV3-23P01764 117 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 H2AFB1P0C5Y9 115 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
CTSD-211ENST00000637387 C15orf32Q32M92 178 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 TIGITQ495A1 244 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 FAM122CQ6P4D5 195 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 NECAP1Q8NC96 275 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 ZNF502Q8TBZ5 544 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 VN1R17PQ8TDU5 208 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 FAM210AQ96ND0 272 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 MS4A10Q96PG2 267 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 SCRT1Q9BWW7 348 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 NPFFR1Q9GZQ6 430 aa11.89□□□□□ -0.51
CTSD-211ENST00000637387 TRAV1-1A0A0B4J248 108 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 CTXND1A0A1B0GTU2 59 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 H3BUA1 57 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 TCF21O43680 179 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 CCL20P78556 96 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 TMEM37Q8WXS4 190 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 PRSS22Q9GZN4 317 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 PFDN2Q9UHV9 154 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 A0A1B0GV50 99 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 MAP1LC3B2A6NCE7 125 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 CDC34P49427 236 aaPredicted RBP11.88□□□□□ -0.51
CTSD-211ENST00000637387 MFAP4P55083 255 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 SELENOTP62341 195 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 SPATA31B1PQ5VZV4 182 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 IL34Q6ZMJ4 242 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 EIF4E3Q8N5X7 224 aaKnown RBP11.88□□□□□ -0.51
CTSD-211ENST00000637387 RAB24Q969Q5 203 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 MAP1LC3BQ9GZQ8 125 aa11.88□□□□□ -0.51
CTSD-211ENST00000637387 SEPSECSQ9HD40 501 aaKnown RBP11.88□□□□□ -0.51
CTSD-211ENST00000637387 CLDN34H7C241 214 aa11.87□□□□□ -0.51
CTSD-211ENST00000637387 HMGB3O15347 200 aaKnown RBP11.87□□□□□ -0.51
CTSD-211ENST00000637387 OR5G3P0C626 314 aa11.87□□□□□ -0.51
CTSD-211ENST00000637387 PSG1P11464 419 aa11.87□□□□□ -0.51
CTSD-211ENST00000637387 ADMP35318 185 aa11.87□□□□□ -0.51
CTSD-211ENST00000637387 FGF8P55075 233 aaPredicted RBP11.87□□□□□ -0.51
CTSD-211ENST00000637387 SRSF3P84103 164 aaKnown RBP11.87□□□□□ -0.51
CTSD-211ENST00000637387 LCN15Q6UWW0 184 aa11.87□□□□□ -0.51
CTSD-211ENST00000637387 SFT2D1Q8WV19 159 aa11.87□□□□□ -0.51
CTSD-211ENST00000637387 MARC2Q969Z3 335 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms