RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 REC114Q7Z4M0 266 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 GPR61Q9BZJ8 451 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 PEMTQ9UBM1 199 aa13.11□□□□□ -0.31
CLN6-218ENST00000637223 IGHV3OR16-8A0A075B7F1 116 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 TSC22D2O75157 780 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 METTL15P1P0C7V9 234 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 EDN2P20800 178 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 GPX4P36969 197 aaPredicted RBP13.1□□□□□ -0.31
CLN6-218ENST00000637223 RELQ04864 619 aaPredicted RBP13.1□□□□□ -0.31
CLN6-218ENST00000637223 TIGITQ495A1 244 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 OR8G2PQ6IF36 304 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 TMEM14EPQ6UXP3 125 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 IL34Q6ZMJ4 242 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 HAPLN4Q86UW8 402 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 ZNF414Q96IQ9 312 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 SLC35E1Q96K37 410 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 C11orf1Q9H5F2 150 aa13.1□□□□□ -0.31
CLN6-218ENST00000637223 PRSS46E5RG02 174 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 G3V3Q6 166 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 LGALS9O00182 355 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 NDUFA4O00483 81 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 YIF1AO95070 293 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 CSN3P07498 182 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 PVALBP20472 110 aaPredicted RBP13.09□□□□□ -0.31
CLN6-218ENST00000637223 C4BPBP20851 252 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 GAMTQ14353 236 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 BEAN1Q3B7T3 259 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 TMEM116Q8NCL8 245 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 TMEM190Q8WZ59 177 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 C20orf24Q9BUV8 137 aa13.09□□□□□ -0.31
CLN6-218ENST00000637223 C2orf70A6NJV1 201 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 PMS2P5A8MQ11 134 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 SCGB2A1O75556 95 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 IGLC1P0CG04 106 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 OR10J1P30954 320 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 CAV2P51636 162 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 TM4SF20Q53R12 229 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 OR1S2Q8NGQ3 325 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 PPP1R1CQ8WVI7 109 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
CLN6-218ENST00000637223 TRAV30A0A087WSZ9 112 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 TMEM213A2RRL7 107 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 FAM24AA6NFZ4 105 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 A8MWP6 167 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 ZNF207O43670 478 aaKnown RBP13.07□□□□□ -0.32
CLN6-218ENST00000637223 DEDDO75618 318 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 LYL1P12980 280 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 INSL3P51460 131 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 ADAMTSL5Q6ZMM2 481 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 ZNF600Q6ZNG1 722 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 ACOT7LQ6ZUV0 252 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 THAP6Q8TBB0 222 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 OR5AC2Q9NZP5 309 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 UFC1Q9Y3C8 167 aa13.07□□□□□ -0.32
CLN6-218ENST00000637223 PUS1Q9Y606 427 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLN6-218ENST00000637223 H0YIZ8 118 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 MPC2O95563 127 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 RLN2P04090 185 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 FOLR2P14207 255 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 KRTAP10-11P60412 298 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 ARL16Q0P5N6 197 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 KPRPQ5T749 579 aaPredicted RBP13.06□□□□□ -0.32
CLN6-218ENST00000637223 TOMM20LQ6UXN7 152 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 SELENOKQ9Y6D0 94 aa13.06□□□□□ -0.32
CLN6-218ENST00000637223 IGSF23A1L1A6 192 aa13.05□□□□□ -0.32
CLN6-218ENST00000637223 SMCO3A2RU48 225 aa13.05□□□□□ -0.32
CLN6-218ENST00000637223 ZFP92A6NM28 416 aa13.05□□□□□ -0.32
CLN6-218ENST00000637223 PRB2P02812 416 aaPredicted RBP13.05□□□□□ -0.32
CLN6-218ENST00000637223 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
CLN6-218ENST00000637223 OR10P1Q8NGE3 313 aa13.05□□□□□ -0.32
CLN6-218ENST00000637223 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
CLN6-218ENST00000637223 IGKV1D-37A0A075B6S9 117 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 TRAV14DV4A0A0A6YYC5 116 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 E5RGE8 158 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 CST7O76096 145 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 CBLN1P23435 193 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 ELLP55199 621 aaPredicted RBP13.04□□□□□ -0.32
CLN6-218ENST00000637223 EGFEM1PQ0D2K5 195 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 ZNF345Q14585 488 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 Q5BKY6 102 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 TMEM252Q8N6L7 170 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 OR11H4Q8NGC9 324 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 DYNLRB2Q8TF09 96 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 ZFAND3Q9H8U3 227 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 DAZ1Q9NQZ3 744 aaKnown RBP13.04□□□□□ -0.32
CLN6-218ENST00000637223 SIGLEC8Q9NYZ4 499 aa13.04□□□□□ -0.32
CLN6-218ENST00000637223 SMLR1H3BR10 107 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 IGLV1-51P01701 117 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 YPEL3P61236 119 aaPredicted RBP13.03□□□□□ -0.32
CLN6-218ENST00000637223 DLK1P80370 383 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 ZNF90Q03938 601 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 ZNF546Q86UE3 836 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 C9orf62Q8N4C0 152 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 TMEM217Q8N7C4 229 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 Q8WTZ3 238 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 RNF126Q9BV68 326 aa13.03□□□□□ -0.32
CLN6-218ENST00000637223 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.32
CLN6-218ENST00000637223 IGKV1OR2-108A0A075B7D4 117 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms