RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 GNB2P62879 340 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 ATP5G2Q06055 141 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 FOXF1Q12946 379 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 LGALS9BQ3B8N2 356 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 LGALSLQ3ZCW2 172 aaPredicted RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 STPG1Q5TH74 334 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 OR2T2Q6IF00 324 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 DNAJC24Q6P3W2 148 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 HEPN1Q6WQI6 88 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 TMEM91Q6ZNR0 172 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 Q6ZS92 163 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 SLC25A26Q70HW3 274 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 MDP1Q86V88 176 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 BPIFA4PQ86YQ2 179 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 C10orf111Q8N326 155 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 NKAPP1Q8N9T2 125 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 COPS9Q8WXC6 57 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 POP5Q969H6 163 aaKnown RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 RBMXL1Q96E39 390 aaKnown RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 MCEEQ96PE7 176 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 TIMM17AQ99595 171 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 HDHD3Q9BSH5 251 aaPredicted RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 PARP12Q9H0J9 701 aaKnown RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 FAM60AQ9NP50 221 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 INSL5Q9Y5Q6 135 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 F11RQ9Y624 299 aaKnown RBP2.24□□□□□ -2.05
VIM-210ENST00000637053 SERP1Q9Y6X1 66 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 PLEKHH2Q8IVE3 1493 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 NCKAP5O14513 1909 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 QRICH2Q9H0J4 1663 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 ADAMTS13Q76LX8 1427 aa2.24□□□□□ -2.05
VIM-210ENST00000637053 KDM5CP41229 1560 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 C2orf16Q68DN1 1984 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 EPRSP07814 1512 aaKnown RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 ADGBQ8N7X0 1667 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 THSD7AQ9UPZ6 1657 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 PRXQ9BXM0 1461 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 NRXN1Q9ULB1 1477 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 IGLV5-37A0A075B6J1 123 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 A0A0D9SEW6 157 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 ZNF705FA8MVS1 300 aaPredicted RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 MCRIP1C9JLW8 97 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 H3BT86 120 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 TMEM256-PLSCR3K7ERE1 68 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 PLA2G10O15496 165 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 NDUFB2O95178 105 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 LTAP01374 205 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 IGKV1-5P01602 117 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 RBP4P02753 201 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 SRP19P09132 144 aaKnown RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 ZNF286BP0CG31 522 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 ZNF705BP0CI00 300 aaPredicted RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 IGLC2P0DOY2 106 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 IGLC3P0DOY3 106 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 TPT1P13693 172 aaKnown RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 ADCYAP1P18509 176 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 CRISP3P54108 245 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 TAS2R45P59539 299 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 HBBP68871 147 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 SPRNQ5BIV9 151 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 LINC01545Q5VT33 79 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 GFI1BQ5VTD9 330 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 PHF5AQ7RTV0 110 aaKnown RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 ZNF329Q86UD4 541 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 GPHB5Q86YW7 130 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 TMEM61Q8N0U2 210 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 APCDD1LQ8NCL9 501 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 OR8A1Q8NGG7 326 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 OR5H2Q8NGV7 314 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 MAL2Q969L2 176 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 LSM10Q969L4 123 aaKnown RBP2.23□□□□□ -2.05
VIM-210ENST00000637053 SHANK2-AS3Q9BTD1 123 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 SLC25A2Q9BXI2 301 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 PARLQ9H300 379 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 SLC25A22Q9H936 323 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 SIX2Q9NPC8 291 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 CCL28Q9NRJ3 127 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 ZNF492Q9P255 531 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 OR5V1Q9UGF6 321 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 MOB4Q9Y3A3 225 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 ECM29Q5VYK3 1845 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 KIF20BQ96Q89 1820 aa2.23□□□□□ -2.05
VIM-210ENST00000637053 FER1L5A0AVI2 2057 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 DYSFO75923 2080 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ARHGAP5Q13017 1502 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 KMT2EQ8IZD2 1858 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 LRRK1Q38SD2 2015 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 ZSWIM8A7E2V4 1837 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 CFTRP13569 1480 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 GOLGA3Q08378 1498 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 TRGV5A0A0B4J1U4 118 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 A0A1W2PP18 115 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 GRIFINA4D1Z8 144 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 H3BRM9 83 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 BUB1B-PAK6H3BSN5 160 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 PITX3O75364 302 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 SNCGO76070 127 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 IGLV2-8P01709 118 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 GYPAP02724 150 aa2.22□□□□□ -2.05
VIM-210ENST00000637053 SHBGP04278 402 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms