RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ZNF439Q8NDP4 499 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 SIGMAR1Q99720 223 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 RAB9BQ9NP90 201 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 TRAV3A0A0B4J244 114 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 RANP62826 216 aaKnown RBP9.37□□□□□ -0.91
CLN6-217ENST00000636964 ACOT6Q3I5F7 207 aaPredicted RBP9.37□□□□□ -0.91
CLN6-217ENST00000636964 Q8N976 141 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 QTRT1Q9BXR0 403 aaKnown RBP9.37□□□□□ -0.91
CLN6-217ENST00000636964 MANBALQ9NQG1 85 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 SLC45A2Q9UMX9 530 aa9.37□□□□□ -0.91
CLN6-217ENST00000636964 F2Z2F3 143 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 PLP1P60201 277 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 RPP25LQ8N5L8 163 aaKnown RBP9.36□□□□□ -0.91
CLN6-217ENST00000636964 PXMP4Q9Y6I8 212 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 A0A1W2PPR1 153 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 MAP1LC3B2A6NCE7 125 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 REG1BP48304 166 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 TMEM204Q9BSN7 226 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 MAP1LC3BQ9GZQ8 125 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 ADMP35318 185 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 MEF2BQ02080 365 aaPredicted RBP9.36□□□□□ -0.91
CLN6-217ENST00000636964 MEF2CQ06413 473 aaPredicted RBP9.36□□□□□ -0.91
CLN6-217ENST00000636964 TCTEX1D1Q8N7M0 179 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 UFC1Q9Y3C8 167 aa9.36□□□□□ -0.91
CLN6-217ENST00000636964 EPG5Q9HCE0 2579 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 G3V4G9 280 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 RPL32P62910 135 aaKnown RBP9.35□□□□□ -0.91
CLN6-217ENST00000636964 SLC25A48Q6ZT89 311 aaKnown RBP9.35□□□□□ -0.91
CLN6-217ENST00000636964 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 ZNF525Q8N782 197 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 DDB2Q92466 427 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 OR5B12Q96R08 314 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 LINC00574Q9H8X3 128 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 C19orf84I3L1E1 186 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 TOX4O94842 621 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 DIAPH2-AS1Q14236 149 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 ITLN2Q8WWU7 325 aaPredicted RBP9.35□□□□□ -0.91
CLN6-217ENST00000636964 ARHGAP32A7KAX9 2087 aa9.35□□□□□ -0.91
CLN6-217ENST00000636964 FAM78BQ5VT40 261 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 VN1R17PQ8TDU5 208 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 IMMP2LQ96T52 175 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 TSPAN13O95857 204 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 CT45A6P0DMU7 189 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 CT45A5P0DMU8 189 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 CT45A7P0DMV0 189 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 DEFA4P12838 97 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 ERVK-16P61578 105 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 OR4A16Q8NH70 328 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 OR4C12Q96R67 309 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 LAMTOR2Q9Y2Q5 125 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 TSSC4Q9Y5U2 329 aaPredicted RBP9.34□□□□□ -0.91
CLN6-217ENST00000636964 FAM90A26D6RGX4 464 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 IGKV1-16P04430 117 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 MYOD1P15172 320 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 CTRLP40313 264 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 TCF24Q7RTU0 167 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 ZNF114Q8NC26 417 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 ONECUT1Q9UBC0 465 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 KAAG1Q9UBP8 84 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
CLN6-217ENST00000636964 FRMD6-AS1P0C7T7 363 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 SSBP2P81877 361 aaPredicted RBP9.33□□□□□ -0.92
CLN6-217ENST00000636964 ZNF586Q9NXT0 402 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 BET1LQ9NYM9 111 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 OR11H12B2RN74 326 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 ESDP10768 282 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 THBS3P49746 956 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 HINT1P49773 126 aaPredicted RBP9.33□□□□□ -0.92
CLN6-217ENST00000636964 TMEM183BQ1AE95 376 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 OR11H1Q8NG94 326 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 OR11H2Q8NH07 326 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 CMTM2Q8TAZ6 248 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 TET2Q6N021 2002 aaPredicted RBP9.33□□□□□ -0.92
CLN6-217ENST00000636964 NDUFS7O75251 213 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 SRP14P37108 136 aaKnown RBP9.33□□□□□ -0.92
CLN6-217ENST00000636964 PPOXP50336 477 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 LRRC75BQ2VPJ9 315 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 TMEM41BQ5BJD5 291 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 ACSM6Q6P461 480 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 OR10X1Q8NGY0 326 aa9.33□□□□□ -0.92
CLN6-217ENST00000636964 MRPL20Q9BYC9 149 aaKnown RBP9.33□□□□□ -0.92
CLN6-217ENST00000636964 TNCP24821 2201 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 SERF1AO75920 110 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 RELBQ01201 579 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 SLC38A11Q08AI6 406 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 C5orf47Q569G3 176 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.32□□□□□ -0.92
CLN6-217ENST00000636964 FBXL7Q9UJT9 491 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 PSG8Q9UQ74 426 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 POLQO75417 2590 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 SRRM4A7MD48 611 aaKnown RBP9.32□□□□□ -0.92
CLN6-217ENST00000636964 PAFAH1B2P68402 229 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 HBG1P69891 147 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 HBG2P69892 147 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 TMEM155Q4W5P6 130 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 TMEM14EPQ6UXP3 125 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 ZNF841Q6ZN19 808 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 SCGB1C1Q8TD33 95 aa9.32□□□□□ -0.92
CLN6-217ENST00000636964 LHX4Q969G2 390 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms