RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 OVOL1O14753 267 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 SCGB2A1O75556 95 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 IGKV1-17P01599 117 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 IGLC1P0CG04 106 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 OR10J1P30954 320 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 SULT1A1P50225 295 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 RELQ04864 619 aaPredicted RBP12.24□□□□□ -0.45
CLN6-216ENST00000636876 FGL1Q08830 312 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 FAM106AQ4KMX7 169 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 STX12Q86Y82 276 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 C1QL4Q86Z23 238 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 OR1S2Q8NGQ3 325 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 THAP6Q8TBB0 222 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 ZNF414Q96IQ9 312 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 SLC25A31Q9H0C2 315 aa12.24□□□□□ -0.45
CLN6-216ENST00000636876 hCG_2014768A0A024R1R8 64 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 SLC38A11Q08AI6 406 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 TIGITQ495A1 244 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 Q5BKY6 102 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 REC114Q7Z4M0 266 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 GGACTQ9BVM4 153 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 MEGF8Q7Z7M0 2845 aa12.23□□□□□ -0.45
CLN6-216ENST00000636876 LGALS9O00182 355 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 NDUFA4O00483 81 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 HBG1P69891 147 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 HBG2P69892 147 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 EWSR1Q01844 656 aaKnown RBP eCLIP12.22□□□□□ -0.45
CLN6-216ENST00000636876 AKR1C1Q04828 323 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 ZNF600Q6ZNG1 722 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 TMEM217Q8N7C4 229 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 THAP8Q8NA92 274 aa12.22□□□□□ -0.45
CLN6-216ENST00000636876 IGKV1D-37A0A075B6S9 117 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 ZNF320A2RRD8 509 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 SMCO3A2RU48 225 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 ZFP92A6NM28 416 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 S100A11P31949 105 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 YPEL3P61236 119 aaPredicted RBP12.21□□□□□ -0.45
CLN6-216ENST00000636876 BAXQ07812 192 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 UNQ9165/PRO28630Q6UXU0 137 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 TMEM144Q7Z5S9 345 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 LILRB2Q8N423 598 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 TMEM190Q8WZ59 177 aa12.21□□□□□ -0.45
CLN6-216ENST00000636876 RCC1LQ96I51 464 aaKnown RBP12.21□□□□□ -0.45
CLN6-216ENST00000636876 A0A1B0GVG6 124 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 G3V3Q6 166 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
CLN6-216ENST00000636876 NHLH2Q02577 135 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 TRGV9Q99603 122 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 MCRIP2Q9BUT9 160 aaKnown RBP12.2□□□□□ -0.46
CLN6-216ENST00000636876 TMEM147Q9BVK8 224 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 NPVFQ9HCQ7 196 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 PEMTQ9UBM1 199 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 HSPB11Q9Y547 144 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 NOTCH1P46531 2555 aa12.2□□□□□ -0.46
CLN6-216ENST00000636876 A8MWP6 167 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 SEC14L6B5MCN3 397 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 YIF1AO95070 293 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 IGLL1P15814 213 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 ATP6V1FQ16864 119 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 TOMM20LQ6UXN7 152 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 ELOVL1Q9BW60 279 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 UQCC1Q9NVA1 299 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 UFC1Q9Y3C8 167 aa12.19□□□□□ -0.46
CLN6-216ENST00000636876 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLN6-216ENST00000636876 IGHV3OR16-8A0A075B7F1 116 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 FXYD6-FXYD2A0A087WZ82 144 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 SMLR1H3BR10 107 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 TOMM40O96008 361 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 FABP1P07148 127 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 RD3LP0DJH9 198 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 ELLP55199 621 aaPredicted RBP12.18□□□□□ -0.46
CLN6-216ENST00000636876 ZNF90Q03938 601 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 VWC2Q2TAL6 325 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 OR5C1Q8NGR4 320 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 Q8WTZ3 238 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 C20orf24Q9BUV8 137 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 ZFAND3Q9H8U3 227 aa12.18□□□□□ -0.46
CLN6-216ENST00000636876 TMEM213A2RRL7 107 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 C2orf70A6NJV1 201 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 CSN3P07498 182 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 PSG1P11464 419 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 NUP62P37198 522 aaPredicted RBP12.17□□□□□ -0.46
CLN6-216ENST00000636876 TM4SF20Q53R12 229 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 C9orf66Q5T8R8 295 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 TEPPQ6URK8 271 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 ZNF546Q86UE3 836 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 AQP10Q96PS8 301 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 GPR61Q9BZJ8 451 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 DAZ1Q9NQZ3 744 aaKnown RBP12.17□□□□□ -0.46
CLN6-216ENST00000636876 WDR83OSQ9Y284 106 aa12.17□□□□□ -0.46
CLN6-216ENST00000636876 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
CLN6-216ENST00000636876 UBE2L5PA0A1B0GUS4 154 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 K7EMT4 169 aa12.16□□□□□ -0.46
CLN6-216ENST00000636876 ZNF207O43670 478 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms