RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	OR5T1	Q8NG75	326 aa		12.52	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR4X1	Q8NH49	305 aa		12.52	□□□□□ -0.41
CACNA1A-231	ENST00000636816	RASL11B	Q9BPW5	248 aa		12.52	□□□□□ -0.41
CACNA1A-231	ENST00000636816	DNAJC4	Q9NNZ3	241 aa		12.52	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C1RL	Q9NZP8	487 aa		12.52	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C11orf94	C9JXX5	98 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	RNF223	E7ERA6	249 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NPPC	P23582	126 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	DEFB113	Q30KQ7	82 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	FANCD2OS	Q96PS1	177 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	UHRF2	Q96PU4	802 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NBPF19	A0A087WUL8	3843 aa		12.51	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SMUG1	Q53HV7	270 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TRGV9	Q99603	122 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	CR1	P17927	2039 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816		J3QKU1	62 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	HLA-DRB1	P01911	266 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SELENOT	P62341	195 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ZNF674	Q2M3X9	581 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TTC9C	Q8N5M4	171 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR51G1	Q8NGK1	321 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	RPUSD4	Q96CM3	377 aa	Known RBP	12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NIPSNAP3B	Q9BS92	247 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	MEGF9	Q9H1U4	602 aa		12.5	□□□□□ -0.41
CACNA1A-231	ENST00000636816	APC	P25054	2843 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NPIPB5	A8MRT5	1133 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	COX7A2P2	O60397	106 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	IGLC1	P0CG04	106 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TIGIT	Q495A1	244 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	LINC01356	Q8N9X3	169 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C22orf15	Q8WYQ4	148 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TVP23C	Q96ET8	276 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	FAM167A-AS1	Q96KT0	104 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	RBM14	Q96PK6	669 aa	Known RBP	12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SSX3	Q99909	188 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TECR	Q9NZ01	308 aa	Known RBP	12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	CSPG4	Q6UVK1	2322 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	IGLV11-55	A0A075B6I3	123 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TRAV20	A0A0B4J274	112 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ZNF727	A8MUV8	499 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR10J4	P0C629	311 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ORM2	P19652	201 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C10orf113	Q5VZT2	155 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C19orf24	Q9BVV8	132 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SLC25A2	Q9BXI2	301 aa		12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	BEX4	Q9NWD9	120 aa	Predicted RBP	12.49	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NAV2	Q8IVL1	2488 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ATP6V0E1	O15342	81 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR7C2	O60412	319 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TAGLN2	P37802	199 aa	Known RBP	12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C5orf56	Q8N8D9	126 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR1B1	Q8NGR6	318 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NANP	Q8TBE9	248 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	PARL	Q9H300	379 aa		12.48	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ZAN	Q9Y493	2812 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TMEM250	H0YL14	139 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	NDUFB8	O95169	186 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TGFA	P01135	160 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	IGKV1-17	P01599	117 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	AMY1A	P04745	511 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	C8orf88	P0DMB2	117 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	LY6E	Q16553	131 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816		Q5PR19	223 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ISOC2	Q96AB3	205 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SMIM7	Q9BQ49	75 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SDF2L1	Q9HCN8	221 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ZNF355P	Q9NSJ1	428 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	PSG1	P11464	419 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	RHEB	Q15382	184 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	ECSCR	Q19T08	205 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR1L6	Q8NGR2	347 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	PSMG3-AS1	Q96PY0	264 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	DERL1	Q9BUN8	251 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SMCO4	Q9NRQ5	59 aa		12.47	□□□□□ -0.41
CACNA1A-231	ENST00000636816		G3V318	75 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	CLN5	O75503	358 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR2J3	O76001	311 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	IGHV3-23	P01764	117 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SNRPC	P09234	159 aa	Known RBP	12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	PYY	P10082	97 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	LOXL1	Q08397	574 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	UNQ5815/PRO19632	Q6UWF5	114 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	LINC00305	Q7Z4B0	112 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	OR1L4	Q8NGR5	311 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	SGMS2	Q8NHU3	365 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	PFDN5	Q99471	154 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	TMUB1	Q9BVT8	246 aa		12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	MRPL32	Q9BYC8	188 aa	Known RBP	12.46	□□□□□ -0.41
CACNA1A-231	ENST00000636816	MDFIC2	A0A1B0GVS7	189 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	NDUFB4	O95168	129 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	GATA3	P23771	443 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	TAS2R45	P59539	299 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	BCL6B	Q8N143	479 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	OR5AU1	Q8NGC0	362 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816		F8W735	103 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816		H3BUX3	64 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	BPIFB3	P59826	476 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	PQLC2	Q6ZP29	291 aa		12.45	□□□□□ -0.42
CACNA1A-231	ENST00000636816	KRTAP1-3	Q8IUG1	177 aa		12.45	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms