RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 A0A0G2JNJ9 132 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 LIMS1P48059 325 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 C2orf68Q2NKX9 166 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 Q5BKY6 102 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 C1QL4Q86Z23 238 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 Q9UFV3 132 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 DKK1O94907 266 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 IGHV4-4A0A075B6R2 117 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 PFN2P35080 140 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 C22orf46C9J442 243 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 C5orf24Q7Z6I8 188 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 OSR1Q8TAX0 266 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 IL36BQ9NZH7 164 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 ESPL1Q14674 2120 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 SMKR1H3BMG3 65 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 COL8A2P25067 703 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 TMEM200BQ69YZ2 307 aa14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 PSMG3Q9BT73 122 aaPredicted RBP14.78□□□□□ -0.04
CACNA1A-227ENST00000636549 IGHV2-26A0A0B4J1V2 119 aa14.77□□□□□ -0.04
CACNA1A-227ENST00000636549 PMS2P5A8MQ11 134 aa14.77□□□□□ -0.04
CACNA1A-227ENST00000636549 OR9G9P0C7N8 305 aa14.77□□□□□ -0.04
CACNA1A-227ENST00000636549 ITGB1BP1O14713 200 aa14.77□□□□□ -0.04
CACNA1A-227ENST00000636549 HOXB1P14653 301 aaPredicted RBP14.77□□□□□ -0.04
CACNA1A-227ENST00000636549 PUSL1Q8N0Z8 303 aaKnown RBP14.77□□□□□ -0.05
CACNA1A-227ENST00000636549 SPXQ9BT56 116 aa14.77□□□□□ -0.05
CACNA1A-227ENST00000636549 A0A0J9YY99 117 aa14.77□□□□□ -0.05
CACNA1A-227ENST00000636549 NXPH4O95158 308 aa14.77□□□□□ -0.05
CACNA1A-227ENST00000636549 SAXO1Q8IYX7 474 aa14.77□□□□□ -0.05
CACNA1A-227ENST00000636549 DKK4Q9UBT3 224 aa14.77□□□□□ -0.05
CACNA1A-227ENST00000636549 THADAQ6YHU6 1953 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 A0A1W2PR77 199 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 FGFBP3Q8TAT2 258 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 ESDP10768 282 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 MCRIP2Q9BUT9 160 aaKnown RBP14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 CYSLTR1Q9Y271 337 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 TRAV8-3A0A0A6YYJ7 113 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 FSTP19883 344 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 GPX4P36969 197 aaPredicted RBP14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 DEFB131AP59861 70 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 ZMAT4Q9H898 229 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 OTORQ9NRC9 128 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 LINC01356Q8N9X3 169 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 PSG8Q9UQ74 426 aa14.76□□□□□ -0.05
CACNA1A-227ENST00000636549 LTBP4Q8N2S1 1624 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE12BA1L429 117 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 VWC2LB2RUY7 222 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE7O76087 117 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE12FP0CL80 117 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE12GP0CL81 117 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE12IP0CL82 117 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 TRBV5-5A0A0J9YX44 114 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 H2BFSP57053 126 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 LINC00205P59089 165 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 NKAPP1Q8N9T2 125 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 MORN2Q502X0 79 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 SLC25A38Q96DW6 304 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 ZNRD1Q9P1U0 126 aa14.75□□□□□ -0.05
CACNA1A-227ENST00000636549 PIN1P1O15428 100 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 PPP1R3EQ9H7J1 279 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 CIARTQ8N365 385 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 IGKV1OR2-108A0A075B7D4 117 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 C14orf178Q8N769 122 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 RCC1LQ96I51 464 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 SMIM6P0DI80 62 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 ZNF660Q6AZW8 331 aaPredicted RBP14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 A8MXK9 166 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 UPK2O00526 184 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 RPL36AP83881 106 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 SS18Q15532 418 aa14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 RPL36ALQ969Q0 106 aaKnown RBP14.74□□□□□ -0.05
CACNA1A-227ENST00000636549 FOXG1P55316 489 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 PSPNO60542 156 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 TRAV12-2A0A075B6T6 113 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 IQCF6A8MYZ5 107 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 LYPD2Q6UXB3 125 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 MS4A6AQ9H2W1 248 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 PEF1Q9UBV8 284 aaKnown RBP14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 RNF114Q9Y508 228 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 IGKCP01834 107 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 STAG3L3P0CL85 134 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 ZNF345Q14585 488 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 SNHG12Q9BXW3 62 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 RSPO3Q9BXY4 272 aaPredicted RBP14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 PI4KAP42356 2102 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 B4DSR2 109 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE2EQ4V326 116 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 SLC50A1Q9BRV3 221 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE2DQ9UEU5 116 aa14.73□□□□□ -0.05
CACNA1A-227ENST00000636549 LOC102723996A0A087X1L8 192 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE6Q13070 117 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 CLDN16Q9Y5I7 305 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 TRAV12-1A0A0B4J245 112 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 EFNA4P52798 201 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 TCF20Q9UGU0 1960 aaKnown RBP14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 SPATA31B1PQ5VZV4 182 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 DPM2O94777 84 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 GAGE2AQ6NT46 116 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 A0A087WV48 116 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 E9PLN8 166 aa14.72□□□□□ -0.05
CACNA1A-227ENST00000636549 APC2O95996 2303 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms