RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 WNT10AQ9GZT5 417 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TNRC6AQ8NDV7 1962 aaKnown RBP3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TFF1P04155 84 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TOMM40O96008 361 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 CXCL1P09341 107 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 OR5AL1P0C617 328 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 DLX6P56179 175 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 JOSD1Q15040 202 aaPredicted RBP3.68□□□□□ -1.82
SCN1A-210ENST00000635776 HCP5Q6MZN7 132 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 HIST3H2BBQ8N257 126 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 GBGT1Q8N5D6 347 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 A0A1W2PPI3 338 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 HBBP68871 147 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 UBTD1Q9HAC8 227 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 RPH3ALQ9UNE2 315 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 FAM186AA6NE01 2351 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 CX3CL1P78423 397 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 NPBQ8NG41 125 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 CACNA1HO95180 2353 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TIMM23O14925 209 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 LINC01559Q495D7 138 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 LYPD2Q6UXB3 125 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 RNF125Q96EQ8 232 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TOX4O94842 621 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 IER3P46695 156 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 Q0VG73 95 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 PRR27Q6MZM9 219 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 MRPL27Q9P0M9 148 aaKnown RBP3.68□□□□□ -1.82
SCN1A-210ENST00000635776 CTSZQ9UBR2 303 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 TRBV6-1A0A0K0K1D8 114 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 UNQ6494/PRO21346Q6UXR6 183 aa3.68□□□□□ -1.82
SCN1A-210ENST00000635776 YTHDF2Q9Y5A9 579 aaKnown RBP3.68□□□□□ -1.82
SCN1A-210ENST00000635776 RNF151Q2KHN1 245 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 BLNKQ8WV28 456 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 ARFGEF3Q5TH69 2177 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 ZNF785A8K8V0 405 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 M0QZ24 198 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 TNFRSF13BO14836 293 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-210ENST00000635776 SIAH2O43255 324 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 AMTP48728 403 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 UNQ5815/PRO19632Q6UWF5 114 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 VMO1Q7Z5L0 202 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 LY6G5BQ8NDX9 201 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 TMUB1Q9BVT8 246 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 RPP21Q9H633 154 aaKnown RBP3.67□□□□□ -1.82
SCN1A-210ENST00000635776 WNK1Q9H4A3 2382 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 IGHV3-72A0A0B4J1Y9 119 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 A0A0G2JLM5 398 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 MFAP2P55001 183 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 WT1-ASQ06250 92 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 CYYR1Q96J86 154 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 HILPDAQ9Y5L2 63 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.67□□□□□ -1.82
SCN1A-210ENST00000635776 PHOX2AO14813 284 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 TCRAP04437 139 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 GCSAMLQ5JQS6 135 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 HIF1ANQ9NWT6 349 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 EML5Q05BV3 1969 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 PDZD11Q5EBL8 140 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 RBPMS2Q6ZRY4 209 aaKnown RBP3.67□□□□□ -1.82
SCN1A-210ENST00000635776 TCF23Q7RTU1 214 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 TMEM191AQ9H0A3 160 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 NDUFA3O95167 84 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 COL8A2P25067 703 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 FAM110DQ8TAY7 271 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-210ENST00000635776 WIPF2Q8TF74 440 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-210ENST00000635776 METTL26Q96S19 204 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 Q9H3A6 140 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 H3BUA1 57 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 IL4P05112 153 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 REG1AP05451 166 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 C1QTNF9P0C862 333 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 G0S2P27469 103 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 SCGB2A2Q13296 93 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 OR2D3Q8NGH3 330 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 SHANK2-AS3Q9BTD1 123 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 BPTFQ12830 3046 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 K7EM74 188 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 WISP2O76076 250 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 CLEC3BP05452 202 aa3.67□□□□□ -1.82
SCN1A-210ENST00000635776 SRRM4A7MD48 611 aaKnown RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 HLA-DRB1P01911 266 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 PAX1P15863 534 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 HNF1AP20823 631 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 C1orf194Q5T5A4 169 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 PET117Q6UWS5 81 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 OR10W1Q8NGF6 305 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 COL25A1Q9BXS0 654 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 MMP23AO75900 390 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 HIST1H2BLQ99880 126 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 RFNGQ9Y644 331 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 IGLC7A0M8Q6 106 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 CLEC12BQ2HXU8 276 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 FA2HQ7L5A8 372 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 SSX7Q7RTT5 188 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 DMRTC2Q8IXT2 367 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-210ENST00000635776 TTC9CQ8N5M4 171 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 SLC25A16P16260 332 aa3.66□□□□□ -1.82
SCN1A-210ENST00000635776 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms