RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 RPP30P78346 268 aaKnown RBP11.69□□□□□ -0.54
LINC00339-209ENST00000635450 HAGHQ16775 308 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 OR10C1Q96KK4 312 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 CITED4Q96RK1 184 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 NEURL2Q9BR09 285 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 TUBA4BQ9H853 241 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 EDA2RQ9HAV5 297 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 NUDT15Q9NV35 164 aa11.69□□□□□ -0.54
LINC00339-209ENST00000635450 MRPL36Q9P0J6 103 aaKnown RBP11.69□□□□□ -0.54
LINC00339-209ENST00000635450 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 WRBO00258 174 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 SYNGR2O43760 224 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 UPK1BO75841 260 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 CD7P09564 240 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 H2AFB2P0C5Z0 115 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 BMI1P35226 326 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 RND2P52198 227 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 ZFAND6Q6FIF0 208 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 PRSS54Q6PEW0 395 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 TOMM20LQ6UXN7 152 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 SLC16A13Q7RTY0 426 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 TMEM116Q8NCL8 245 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 OR52B4Q8NGK2 314 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 OR1S2Q8NGQ3 325 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 TMEM170AQ8WVE7 144 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 SMPXQ9UHP9 88 aa11.68□□□□□ -0.54
LINC00339-209ENST00000635450 PAIP2BQ9ULR5 123 aaKnown RBP11.68□□□□□ -0.54
LINC00339-209ENST00000635450 PUS1Q9Y606 427 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00339-209ENST00000635450 ASAH1Q13510 395 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 MITD1Q8WV92 249 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 ACY3Q96HD9 319 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 FAM110AQ9BQ89 295 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 MAGT1Q9H0U3 335 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 TBC1D24Q9ULP9 559 aa11.67□□□□□ -0.54
LINC00339-209ENST00000635450 OR10J1P30954 320 aa11.66□□□□□ -0.54
LINC00339-209ENST00000635450 NKX2-1P43699 371 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-209ENST00000635450 TIGITQ495A1 244 aa11.66□□□□□ -0.54
LINC00339-209ENST00000635450 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
LINC00339-209ENST00000635450 SLC35E1Q96K37 410 aa11.66□□□□□ -0.54
LINC00339-209ENST00000635450 SPAG8Q99932 426 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-209ENST00000635450 RHPN1-AS1Q9BWJ2 59 aa11.66□□□□□ -0.54
LINC00339-209ENST00000635450 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
LINC00339-209ENST00000635450 DNAH1Q9P2D7 4330 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 IGHV3-49A0A0A0MS15 119 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 MPTX1A8MV57 137 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 OR11H12B2RN74 326 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 CHEK1O14757 476 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 TSPAN4O14817 238 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 LYL1P12980 280 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 GPX4P36969 197 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-209ENST00000635450 IAH1Q2TAA2 248 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-209ENST00000635450 DEFB125Q8N687 156 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-209ENST00000635450 Q8WTZ3 238 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 NPIPB3Q92617 1050 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 NARS2Q96I59 477 aaKnown RBP11.65□□□□□ -0.54
LINC00339-209ENST00000635450 METTL26Q96S19 204 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 SPATA25Q9BR10 227 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 TMEM231Q9H6L2 316 aa11.65□□□□□ -0.54
LINC00339-209ENST00000635450 A0A1W2PS18 150 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 RBMY1BA6NDE4 496 aaKnown RBP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 RBMY1EA6NEQ0 496 aaKnown RBP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 SCGB1D2O95969 90 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 IGKV1-17P01599 117 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 CD5P06127 495 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 RBMY1DP0C7P1 496 aaKnown RBP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 IGLC1P0CG04 106 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 NPPCP23582 126 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 YPEL3P61236 119 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 ID3Q02535 119 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 SPANXN5Q5MJ07 72 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 LINC00322Q6ZN03 302 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 RNF2Q99496 336 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 SEC22CQ9BRL7 303 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 GSKIPQ9P0R6 139 aa11.64□□□□□ -0.55
LINC00339-209ENST00000635450 STRAPQ9Y3F4 350 aaKnown RBP11.64□□□□□ -0.55
LINC00339-209ENST00000635450 IGHV3OR16-13A0A075B7E8 117 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 IGHV3-74A0A0B4J1X5 117 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 OR4C46A6NHA9 309 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 DEFA1P59665 94 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 DEFA3P59666 94 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 C12orf45Q8N5I9 185 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-209ENST00000635450 ZBTB8BQ8NAP8 495 aaPredicted RBP11.63□□□□□ -0.55
LINC00339-209ENST00000635450 OR4D5Q8NGN0 318 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 PSENENQ9NZ42 101 aa11.63□□□□□ -0.55
LINC00339-209ENST00000635450 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 FAM25EA8MYX2 175 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 SSSCA1O60232 199 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 TOMM40O96008 361 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 PAFAH1B2P68402 229 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 GAMTQ14353 236 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 TCF24Q7RTU0 167 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 ST8SIA2Q92186 375 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 VSIRQ9H7M9 311 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 SRD5A3Q9H8P0 318 aa11.62□□□□□ -0.55
LINC00339-209ENST00000635450 GPN1Q9HCN4 374 aaPredicted RBP11.62□□□□□ -0.55
LINC00339-209ENST00000635450 IGKV3-7A0A075B6H7 116 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms