RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 STRAPQ9Y3F4 350 aaKnown RBP11.16□□□□□ -0.62
CDC42BPB-209ENST00000634889 IGKV1-17P01599 117 aa11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 MBPP02686 304 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 OR10J1P30954 320 aa11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 YPEL3P61236 119 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 NPIPB3Q92617 1050 aa11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 SLC35E1Q96K37 410 aa11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 ZFAND3Q9H8U3 227 aa11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 PAIP2BQ9ULR5 123 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 RCL1Q9Y2P8 373 aaKnown RBP11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDC42BPB-209ENST00000634889 IGHV3OR16-8A0A075B7F1 116 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 PRSS46E5RG02 174 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 H3BP45 60 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 TSC22D2O75157 780 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 GAMTQ14353 236 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 BTNL8Q6UX41 500 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 TOMM20LQ6UXN7 152 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 ACY3Q96HD9 319 aa11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 LSM4Q9Y4Z0 139 aaKnown RBP11.14□□□□□ -0.63
CDC42BPB-209ENST00000634889 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 TRAV25A0A0B4J276 109 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 IZUMO1RA6ND01 250 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 BMI1P35226 326 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 PAX9P55771 341 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 TIGITQ495A1 244 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 GTSCR1Q86UQ5 136 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 TMEM61Q8N0U2 210 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 SMPXQ9UHP9 88 aa11.13□□□□□ -0.63
CDC42BPB-209ENST00000634889 IGHV7-4-1A0A0J9YVY3 117 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 C7orf66A4D0T2 115 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 K7EPK0 472 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 SCAF4O95104 1147 aaKnown RBP11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 IL15RAQ13261 267 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 DEFB121Q5J5C9 76 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 TMEM14EPQ6UXP3 125 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 Q8WTZ3 238 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 SMAD5-AS1Q9Y6J3 95 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 SORL1Q92673 2214 aa11.12□□□□□ -0.63
CDC42BPB-209ENST00000634889 ZFP92A6NM28 416 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 L7N2F9 121 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 GOSR2O14653 212 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 CHEK1O14757 476 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 TOMM40O96008 361 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 FABP1P07148 127 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 PVALBP20472 110 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 VAMP2P63027 116 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 RBPMS2Q6ZRY4 209 aaKnown RBP11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 NMES1Q9C002 83 aa11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 LSM5Q9Y4Y9 91 aaKnown RBP11.11□□□□□ -0.63
CDC42BPB-209ENST00000634889 ZNF785A8K8V0 405 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 FNDC10F2Z333 226 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 SSNA1O43805 119 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 CD5P06127 495 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 RD3LP0DJH9 198 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 NPPCP23582 126 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 CYCSP99999 105 aaKnown RBP11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 GUCA2BQ16661 112 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 LAMTOR1Q6IAA8 161 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 ACOT7LQ6ZUV0 252 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 Q8N1Y9 231 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 THAP8Q8NA92 274 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 OR10P1Q8NGE3 313 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 METTL26Q96S19 204 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 TRGV9Q99603 122 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 RHPN1-AS1Q9BWJ2 59 aa11.1□□□□□ -0.63
CDC42BPB-209ENST00000634889 IGKV1D-37A0A075B6S9 117 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 TSPAN4O14817 238 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 CRYBB3P26998 211 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 S100A10P60903 97 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 DLK1P80370 383 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 RAB32Q13637 225 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 RGS21Q2M5E4 152 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 OR8G2PQ6IF36 304 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 OR51G1Q8NGK1 321 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 NARS2Q96I59 477 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 C11orf1Q9H5F2 150 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 TMEM231Q9H6L2 316 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 PRKDCP78527 4128 aaKnown RBP11.09□□□□□ -0.63
CDC42BPB-209ENST00000634889 IGKV1OR2-108A0A075B7D4 117 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 A0A1W2PS18 150 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 A8MZ25 164 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 SIX6O95475 246 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 IL4P05112 153 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 PSG1P11464 419 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 AKR1C1Q04828 323 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 TMEM144Q7Z5S9 345 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 RNF2Q99496 336 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 B9D2Q9BPU9 175 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 GGACTQ9BVM4 153 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 LYRM2Q9NU23 88 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 SELENOKQ9Y6D0 94 aa11.08□□□□□ -0.64
CDC42BPB-209ENST00000634889 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms