RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LINC00299Q6ZSB3 139 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 LYG2Q86SG7 212 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 Q8WTZ3 238 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 S100ZQ8WXG8 99 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 ACY3Q96HD9 319 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 NARS2Q96I59 477 aaKnown RBP11.75□□□□□ -0.53
LINC00339-207ENST00000634712 ZNF414Q96IQ9 312 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 CIB3Q96Q77 187 aaPredicted RBP11.75□□□□□ -0.53
LINC00339-207ENST00000634712 CCDC32Q9BV29 185 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 TMEM231Q9H6L2 316 aa11.75□□□□□ -0.53
LINC00339-207ENST00000634712 A0A1W2PS18 150 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 PLA2G10O15496 165 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 IAPPP10997 89 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 BTCP35070 178 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 DHRS2Q13268 280 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 METTL26Q96S19 204 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 ZFAND3Q9H8U3 227 aa11.74□□□□□ -0.53
LINC00339-207ENST00000634712 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 RBMY1BA6NDE4 496 aaKnown RBP11.73□□□□□ -0.53
LINC00339-207ENST00000634712 RBMY1EA6NEQ0 496 aaKnown RBP11.73□□□□□ -0.53
LINC00339-207ENST00000634712 A6NHS1 94 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 SYNGR2O43760 224 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 RBMY1DP0C7P1 496 aaKnown RBP11.73□□□□□ -0.53
LINC00339-207ENST00000634712 TFPI2P48307 235 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 CMC4P56277 68 aaPredicted RBP11.73□□□□□ -0.53
LINC00339-207ENST00000634712 RPL11P62913 178 aaKnown RBP11.73□□□□□ -0.53
LINC00339-207ENST00000634712 TCF24Q7RTU0 167 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 ST8SIA2Q92186 375 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 MAGT1Q9H0U3 335 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 UBQLN2Q9UHD9 624 aa11.73□□□□□ -0.53
LINC00339-207ENST00000634712 IGHV3-66A0A0C4DH42 116 aa11.72□□□□□ -0.53
LINC00339-207ENST00000634712 DNASE2O00115 360 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-207ENST00000634712 WRBO00258 174 aa11.72□□□□□ -0.53
LINC00339-207ENST00000634712 ADAP1O75689 374 aa11.72□□□□□ -0.53
LINC00339-207ENST00000634712 IGLC1P0CG04 106 aa11.72□□□□□ -0.53
LINC00339-207ENST00000634712 GPX4P36969 197 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-207ENST00000634712 YPEL3P61236 119 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-207ENST00000634712 LINC00322Q6ZN03 302 aaPredicted RBP11.72□□□□□ -0.53
LINC00339-207ENST00000634712 SLC35E1Q96K37 410 aa11.72□□□□□ -0.53
LINC00339-207ENST00000634712 C20orf85Q9H1P6 137 aa11.72□□□□□ -0.53
LINC00339-207ENST00000634712 HUWE1Q7Z6Z7 4374 aaKnown RBP11.71□□□□□ -0.53
LINC00339-207ENST00000634712 LOC102724200A0A096LPH7 203 aaPredicted RBP11.71□□□□□ -0.53
LINC00339-207ENST00000634712 APOHP02749 345 aaPredicted RBP11.71□□□□□ -0.53
LINC00339-207ENST00000634712 TCRBP04435 133 aa11.71□□□□□ -0.53
LINC00339-207ENST00000634712 RD3LP0DJH9 198 aa11.71□□□□□ -0.53
LINC00339-207ENST00000634712 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
LINC00339-207ENST00000634712 GRAMD2BQ96HH9 432 aa11.71□□□□□ -0.53
LINC00339-207ENST00000634712 VSIRQ9H7M9 311 aa11.71□□□□□ -0.53
LINC00339-207ENST00000634712 TRAV6A0A075B6T7 132 aa11.7□□□□□ -0.54
LINC00339-207ENST00000634712 DFFBO76075 338 aa11.7□□□□□ -0.54
LINC00339-207ENST00000634712 MZT2BQ6NZ67 158 aa11.7□□□□□ -0.54
LINC00339-207ENST00000634712 WFDC3Q8IUB2 231 aa11.7□□□□□ -0.54
LINC00339-207ENST00000634712 GGTLC1Q9BX51 225 aa11.7□□□□□ -0.54
LINC00339-207ENST00000634712 FAM240BA0A1B0GVZ2 78 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 ZFP92A6NM28 416 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 IL4P05112 153 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 FABP1P07148 127 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 CRYBB3P26998 211 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 NKX2-1P43699 371 aaPredicted RBP11.69□□□□□ -0.54
LINC00339-207ENST00000634712 GAMTQ14353 236 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 SPANXN5Q5MJ07 72 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 FAM90A2PQ658T7 463 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 WDR12Q9GZL7 423 aaKnown RBP11.69□□□□□ -0.54
LINC00339-207ENST00000634712 PTTG2Q9NZH5 202 aa11.69□□□□□ -0.54
LINC00339-207ENST00000634712 TOMM40O96008 361 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 HNRNPCP07910 306 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC00339-207ENST00000634712 EIF2B2P49770 351 aaKnown RBP11.68□□□□□ -0.54
LINC00339-207ENST00000634712 ID3Q02535 119 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 ZNF846Q147U1 533 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 ODF3L2Q3SX64 289 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 LILRB2Q8N423 598 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 MITD1Q8WV92 249 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 FAM110AQ9BQ89 295 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 NUDT15Q9NV35 164 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 GSKIPQ9P0R6 139 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 RABAC1Q9UI14 185 aa11.68□□□□□ -0.54
LINC00339-207ENST00000634712 STRAPQ9Y3F4 350 aaKnown RBP11.68□□□□□ -0.54
LINC00339-207ENST00000634712 MPTX1A8MV57 137 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 SCGB1D2O95969 90 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 H2AFB2P0C5Z0 115 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 PSG1P11464 419 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 P2RY1P47900 373 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 APOC4P55056 127 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 POLR2GP62487 172 aaKnown RBP eCLIP11.67□□□□□ -0.54
LINC00339-207ENST00000634712 IAH1Q2TAA2 248 aaPredicted RBP11.67□□□□□ -0.54
LINC00339-207ENST00000634712 OR51G1Q8NGK1 321 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 CITED4Q96RK1 184 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 MS4A6AQ9H2W1 248 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 RETNQ9HD89 108 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 BATF3Q9NR55 127 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 PFDN2Q9UHV9 154 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 STAB2Q8WWQ8 2551 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 APRG1Q8IVJ8 170 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 STXBP6Q8NFX7 210 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 PSENENQ9NZ42 101 aa11.67□□□□□ -0.54
LINC00339-207ENST00000634712 TENM3Q9P273 2699 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms