RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 MBD3L4A6NDZ8 208 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-220ENST00000630424 MBD3L3A6NE82 208 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-220ENST00000630424 MBD3L5A6NJ08 208 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-220ENST00000630424 ATP5LO75964 103 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 PYYP10082 97 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 MBD3L2Q8NHZ7 208 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-220ENST00000630424 CXorf65A6NEN9 183 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 J3QKU1 62 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 SOD3P08294 240 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 PRB4P10163 310 aaPredicted RBP11.7□□□□□ -0.54
UBE3A-220ENST00000630424 BMPERQ8N8U9 685 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 CD8AP01732 235 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 ZNF688P0C7X2 276 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 PRCDQ00LT1 54 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 KLHL30-AS1Q8NEE0 82 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 OR9G4Q8NGQ1 327 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 CD55P08174 381 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 NAT1P18440 290 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 OR10J3Q5JRS4 329 aa11.7□□□□□ -0.54
UBE3A-220ENST00000630424 CCL1P22362 96 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 RIPPLY3P57055 190 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 LCNL1Q6ZST4 164 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 DTX2Q86UW9 622 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 MINOS1Q5TGZ0 78 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 Q6AWC8 147 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 PIP4P2Q8N4L2 257 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 FOXC2Q99958 501 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 MINOS1-NBL1R4GNA1 71 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 ORMDL3Q8N138 153 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 JKAMPQ9P055 326 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 DPRXA6NFQ7 191 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 PSPNO60542 156 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 RPL35AP18077 110 aaKnown RBP11.69□□□□□ -0.54
UBE3A-220ENST00000630424 KLF17Q5JT82 389 aaPredicted RBP11.69□□□□□ -0.54
UBE3A-220ENST00000630424 TPTE2P1Q5T6R2 138 aa11.69□□□□□ -0.54
UBE3A-220ENST00000630424 IGKV1-12A0A0C4DH73 117 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 IGKV1D-12P01611 117 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 GFI1BQ5VTD9 330 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 VCX2Q9H322 139 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 UQCR10Q9UDW1 63 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 IGHV1-3A0A0C4DH29 117 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 PRR32B1ATL7 298 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 ZNF474Q6S9Z5 364 aaPredicted RBP11.68□□□□□ -0.54
UBE3A-220ENST00000630424 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 RNF114Q9Y508 228 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 TEX38Q6PEX7 206 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 TMEM183AQ8IXX5 376 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 OOSP1A8MZH6 123 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 C1QTNF9BB2RNN3 333 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 LILRA1O75019 489 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 C1QTNF9P0C862 333 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 CMC4P56277 68 aaPredicted RBP11.68□□□□□ -0.54
UBE3A-220ENST00000630424 ZNF257Q9Y2Q1 563 aa11.68□□□□□ -0.54
UBE3A-220ENST00000630424 COL8A2P25067 703 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 Q5PR19 223 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 ST20Q9HBF5 79 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 IFI27P40305 119 aaPredicted RBP11.67□□□□□ -0.54
UBE3A-220ENST00000630424 Q71RC1 249 aaPredicted RBP11.67□□□□□ -0.54
UBE3A-220ENST00000630424 IL36BQ9NZH7 164 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.67□□□□□ -0.54
UBE3A-220ENST00000630424 LYPD3O95274 346 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 NABP1Q96AH0 204 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 IMMP2LQ96T52 175 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
UBE3A-220ENST00000630424 K7ERU9 68 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 RPL15P61313 204 aaKnown RBP11.66□□□□□ -0.54
UBE3A-220ENST00000630424 FBLN5Q9UBX5 448 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 FANCMQ8IYD8 2048 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 OVOL1O14753 267 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 IGHG3P01860 377 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 EPDR1Q9UM22 224 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 OTOGLQ3ZCN5 2332 aa11.66□□□□□ -0.54
UBE3A-220ENST00000630424 LHFPL4Q7Z7J7 247 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 FAM89BQ8N5H3 189 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 COTL1Q14019 142 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 C5orf64Q2M2E5 130 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 ZNF324BQ6AW86 544 aaPredicted RBP11.65□□□□□ -0.54
UBE3A-220ENST00000630424 TTC9CQ8N5M4 171 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 CD177Q8N6Q3 437 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 IGKV1D-8A0A087WSZ0 117 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 KLHDC3Q9BQ90 382 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 MBNL3Q9NUK0 354 aaKnown RBP11.65□□□□□ -0.54
UBE3A-220ENST00000630424 SCN5AQ14524 2016 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 A0A1B0GW15 77 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 PLP1P60201 277 aa11.65□□□□□ -0.54
UBE3A-220ENST00000630424 SEPSECSQ9HD40 501 aaKnown RBP11.65□□□□□ -0.54
UBE3A-220ENST00000630424 RNASE7Q9H1E1 156 aaKnown RBP11.64□□□□□ -0.55
UBE3A-220ENST00000630424 NPIPB5A8MRT5 1133 aa11.64□□□□□ -0.55
UBE3A-220ENST00000630424 TCF21O43680 179 aa11.64□□□□□ -0.55
UBE3A-220ENST00000630424 NDPQ00604 133 aa11.64□□□□□ -0.55
UBE3A-220ENST00000630424 GTF3C1Q12789 2109 aa11.64□□□□□ -0.55
UBE3A-220ENST00000630424 M0R1W7 72 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms