RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 IGFBPL1Q8WX77 278 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 S1PR3Q99500 378 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 IGHV3-64DA0A0J9YX35 117 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 C20orf202A1L168 122 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 K7ERU9 68 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 SLC17A3O00476 420 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 IGKV1-39P01597 117 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 IGLV2-14P01704 120 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 IGKV1D-39P04432 117 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 BCL2P10415 239 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 ESDP10768 282 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 IAPPP10997 89 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 Q6ZRM9 215 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF645Q8N7E2 425 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 SDSLQ96GA7 329 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 RPRMQ9NS64 109 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 VAX2Q9UIW0 290 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 TIMM9Q9Y5J7 89 aa9.39□□□□□ -0.91
LINC00538-201ENST00000626109 ARID1AO14497 2285 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 UTP20O75691 2785 aaKnown RBP9.38□□□□□ -0.91
LINC00538-201ENST00000626109 IGKV1-5P01602 117 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 IRF2P14316 349 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 ELOBQ15370 118 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 SPANXN5Q5MJ07 72 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 WDR86Q86TI4 376 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 MMD2Q8IY49 270 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 DRAM1Q8N682 238 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
LINC00538-201ENST00000626109 SSBP4Q9BWG4 385 aaPredicted RBP9.38□□□□□ -0.91
LINC00538-201ENST00000626109 WDR61Q9GZS3 305 aaKnown RBP9.38□□□□□ -0.91
LINC00538-201ENST00000626109 PRYO14603 147 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 PPIHO43447 177 aaKnown RBP9.37□□□□□ -0.91
LINC00538-201ENST00000626109 GGCTO75223 188 aaKnown RBP9.37□□□□□ -0.91
LINC00538-201ENST00000626109 PAX1P15863 534 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 HOXA5P20719 270 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 IL2RGP31785 369 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 KLF5Q13887 457 aaPredicted RBP9.37□□□□□ -0.91
LINC00538-201ENST00000626109 SPRNQ5BIV9 151 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 SLC35E4Q6ICL7 350 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 CIB3Q96Q77 187 aaPredicted RBP9.37□□□□□ -0.91
LINC00538-201ENST00000626109 SLC39A9Q9NUM3 307 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 ZFP92A6NM28 416 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 C15orf65H3BRN8 121 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 SOX15O60248 233 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 EFNA4P52798 201 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 GAGE5Q13069 117 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 GAGE6Q13070 117 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 LCN15Q6UWW0 184 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 TAF15Q92804 592 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00538-201ENST00000626109 THYN1Q9P016 225 aa9.37□□□□□ -0.91
LINC00538-201ENST00000626109 PTPN13Q12923 2485 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 DSCAMO60469 2012 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 TRAV39A0A0B4J263 110 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 IGHV1-69-2A0A0G2JMI3 117 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 S100A2P29034 98 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 TCTAP57738 103 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 SLC38A11Q08AI6 406 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 IZUMO4Q1ZYL8 232 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 MRPL52Q86TS9 123 aaKnown RBP9.36□□□□□ -0.91
LINC00538-201ENST00000626109 TPRX1Q8N7U7 411 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 RNF183Q96D59 192 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 RCHY1Q96PM5 261 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 OR4C12Q96R67 309 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 HES4Q9HCC6 221 aa9.36□□□□□ -0.91
LINC00538-201ENST00000626109 SPANXB1Q9NS25 103 aaPredicted RBP9.36□□□□□ -0.91
LINC00538-201ENST00000626109 HRNRQ86YZ3 2850 aaPredicted RBP9.36□□□□□ -0.91
LINC00538-201ENST00000626109 ARFGEF3Q5TH69 2177 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 MAP1LC3B2A6NCE7 125 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 TNFRSF13BO14836 293 aaPredicted RBP9.35□□□□□ -0.91
LINC00538-201ENST00000626109 NDUFS7O75251 213 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 WDR82Q6UXN9 313 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF826PQ6ZT77 177 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 Q8TCH9 128 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 CCL17Q92583 94 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 Q96MF0 132 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 MAP1LC3BQ9GZQ8 125 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 RBKSQ9H477 322 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 SIGLEC9Q9Y336 463 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 CEBPZOSA8MTT3 80 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 GNG7O60262 68 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF737O75373 536 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 LY6HO94772 140 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 IGHV4-39P01824 125 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 GATA1P15976 413 aaPredicted RBP9.35□□□□□ -0.91
LINC00538-201ENST00000626109 PSMB3P49720 205 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 NDUFA6P56556 154 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 ARL16Q0P5N6 197 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 OCIAD2Q56VL3 154 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 TMEM97Q5BJF2 176 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 ZNF66Q6ZN08 573 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 C11orf53Q8IXP5 236 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 OR10P1Q8NGE3 313 aa9.35□□□□□ -0.91
LINC00538-201ENST00000626109 OR4C13Q8NGP0 309 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms