RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 FCGR1BQ92637 280 aa10.42□□□□□ -0.74
PNKP-218ENST00000625299 ATG101Q9BSB4 218 aa10.42□□□□□ -0.74
PNKP-218ENST00000625299 NRN1Q9NPD7 142 aa10.42□□□□□ -0.74
PNKP-218ENST00000625299 U3KQE9 123 aa10.42□□□□□ -0.74
PNKP-218ENST00000625299 HLA-DRB4X5D2U9 266 aa10.42□□□□□ -0.74
PNKP-218ENST00000625299 TRAV30A0A087WSZ9 112 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 A0A0B4J293 547 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 NAT1P18440 290 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 GDF5OSQ5U4N7 250 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 Q8N1X5 172 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 Q8WTZ3 238 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 YTHDF1Q9BYJ9 559 aaKnown RBP10.41□□□□□ -0.74
PNKP-218ENST00000625299 SCRT2Q9NQ03 307 aa10.41□□□□□ -0.74
PNKP-218ENST00000625299 INS-IGF2F8WCM5 200 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 IL4P05112 153 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 PRSS3P35030 304 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 DHODHQ02127 395 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 USF2Q15853 346 aaPredicted RBP10.4□□□□□ -0.74
PNKP-218ENST00000625299 UBE2NLQ5JXB2 153 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 LYSMD2Q8IV50 215 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 OR1S2Q8NGQ3 325 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 C7orf50Q9BRJ6 194 aaKnown RBP10.4□□□□□ -0.74
PNKP-218ENST00000625299 VCX3BQ9H321 246 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 YTHDF2Q9Y5A9 579 aaKnown RBP10.4□□□□□ -0.74
PNKP-218ENST00000625299 DNAH5Q8TE73 4624 aa10.4□□□□□ -0.74
PNKP-218ENST00000625299 LOC102723971A0A1B0GUV8 181 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 RPS10-NUDT3A0A1W2PQS6 291 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 IGLC1P0CG04 106 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 PGAM2P15259 253 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 OR10J1P30954 320 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 NKX2-1P43699 371 aaPredicted RBP10.39□□□□□ -0.75
PNKP-218ENST00000625299 RPL5P46777 297 aaKnown RBP10.39□□□□□ -0.75
PNKP-218ENST00000625299 RND2P52198 227 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 DAD1P61803 113 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 C6orf223Q8N319 242 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 SAMD12Q8N8I0 201 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 OR4B1Q8NGF8 309 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 LINC00052Q96N35 136 aa10.39□□□□□ -0.75
PNKP-218ENST00000625299 NBDYA0A0U1RRE5 68 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 HBE1P02100 147 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 PI3P19957 117 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 TRIM16LQ309B1 348 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 RNASE11Q8TAA1 199 aaKnown RBP10.38□□□□□ -0.75
PNKP-218ENST00000625299 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 SLC35B3Q9H1N7 401 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 SEPSECSQ9HD40 501 aaKnown RBP10.38□□□□□ -0.75
PNKP-218ENST00000625299 GOLT1BQ9Y3E0 138 aa10.38□□□□□ -0.75
PNKP-218ENST00000625299 BUB3O43684 328 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 GSTZ1O43708 216 aaPredicted RBP10.37□□□□□ -0.75
PNKP-218ENST00000625299 ATG12O94817 140 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 P0C879 139 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 TGFBR1P36897 503 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 UCP3P55916 312 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 FAM3BP58499 235 aaPredicted RBP10.37□□□□□ -0.75
PNKP-218ENST00000625299 OXA1LQ15070 435 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 PRSS54Q6PEW0 395 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 C15orf53Q8NAA6 179 aa10.37□□□□□ -0.75
PNKP-218ENST00000625299 SAV1Q9H4B6 383 aaPredicted RBP10.37□□□□□ -0.75
PNKP-218ENST00000625299 PIGPP57054 158 aa10.36□□□□□ -0.75
PNKP-218ENST00000625299 YPEL3P61236 119 aaPredicted RBP10.36□□□□□ -0.75
PNKP-218ENST00000625299 BSXQ3C1V8 233 aa10.36□□□□□ -0.75
PNKP-218ENST00000625299 SPATA12Q7Z6I5 190 aa10.36□□□□□ -0.75
PNKP-218ENST00000625299 ZNF709Q8N972 641 aa10.36□□□□□ -0.75
PNKP-218ENST00000625299 COQ8AQ8NI60 647 aa10.36□□□□□ -0.75
PNKP-218ENST00000625299 RRNAD1Q96FB5 475 aaKnown RBP10.36□□□□□ -0.75
PNKP-218ENST00000625299 A0A0G2JRQ6 117 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 C3orf85A0A1B0GTC6 90 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 M0QYG6 137 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 NUDT3O95989 172 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 SLC25A4P12235 298 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 RCVRNP35243 200 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 HTR2BP41595 481 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 RORCP51449 518 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 SP6Q3SY56 376 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 FOXI2Q6ZQN5 318 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 SNX29P2Q8IUI4 249 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 C1orf158Q8N1D5 194 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 GPX8Q8TED1 209 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 ACY3Q96HD9 319 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 PBDC1Q9BVG4 233 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 MAGT1Q9H0U3 335 aa10.35□□□□□ -0.75
PNKP-218ENST00000625299 HEYLQ9NQ87 328 aaPredicted RBP10.35□□□□□ -0.75
PNKP-218ENST00000625299 F6UB75 175 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 TMEM127O75204 238 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 RD3LP0DJH9 198 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 ID1P41134 155 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 RND3P61587 244 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 PSG9Q00887 426 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 NEDD8Q15843 81 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 CROCCP3Q8IVE0 287 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 ZNRF2Q8NHG8 242 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 NPIPB3Q92617 1050 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 TMEM208Q9BTX3 173 aa10.34□□□□□ -0.75
PNKP-218ENST00000625299 WDR12Q9GZL7 423 aaKnown RBP10.34□□□□□ -0.75
PNKP-218ENST00000625299 SCPEP1Q9HB40 452 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms