RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 BORCS7-ASMTA0A0B4J1R7 106 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 A0A0G2JLM5 398 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 NPIPB5A8MRT5 1133 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 OVOL1O14753 267 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 RGS13O14921 159 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 JTBO76095 146 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 HSPB1P04792 205 aaKnown RBP9.73□□□□□ -0.85
PNKP-217ENST00000625216 CRYGCP07315 174 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 ATP5IP56385 69 aaPredicted RBP9.73□□□□□ -0.85
PNKP-217ENST00000625216 TPPP2P59282 170 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 ATP6V1FQ16864 119 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 TEX261Q6UWH6 196 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 ALKAL2Q6UX46 152 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 BAP18Q8IXM2 172 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 HSD17B11Q8NBQ5 300 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 ZNF680Q8NEM1 530 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 OR1P1Q8NH06 330 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 MS4A10Q96PG2 267 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 B9D2Q9BPU9 175 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 FNDC4Q9H6D8 234 aaPredicted RBP9.73□□□□□ -0.85
PNKP-217ENST00000625216 UQCC1Q9NVA1 299 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 RFNGQ9Y644 331 aa9.73□□□□□ -0.85
PNKP-217ENST00000625216 PRH1P02810 166 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 TRGV3P03979 118 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
PNKP-217ENST00000625216 CD69Q07108 199 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 ZNF266Q14584 549 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 MLANAQ16655 118 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 SLC16A13Q7RTY0 426 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 TTC9CQ8N5M4 171 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 RNASEH2CQ8TDP1 164 aaKnown RBP9.72□□□□□ -0.85
PNKP-217ENST00000625216 MISP3Q96FF7 219 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 GINS3Q9BRX5 216 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 PARD6GQ9BYG4 376 aaPredicted RBP9.72□□□□□ -0.85
PNKP-217ENST00000625216 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
PNKP-217ENST00000625216 SH3BGRL3Q9H299 93 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
PNKP-217ENST00000625216 SMCO3A2RU48 225 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 IFNA5P01569 189 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 ATP6V0CP27449 155 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 EIF5AP63241 154 aaKnown RBP9.71□□□□□ -0.86
PNKP-217ENST00000625216 DEFA5Q01523 94 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 FAM74A1Q5RGS3 127 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 OR5T1Q8NG75 326 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 TMED6Q8WW62 240 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 DLX4Q92988 240 aaPredicted RBP9.71□□□□□ -0.86
PNKP-217ENST00000625216 FANCD2OSQ96PS1 177 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 RSG1Q9BU20 258 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 GGACTQ9BVM4 153 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 PLA2G2EQ9NZK7 142 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.86
PNKP-217ENST00000625216 WDR83OSQ9Y284 106 aa9.71□□□□□ -0.86
PNKP-217ENST00000625216 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
PNKP-217ENST00000625216 LSM4Q9Y4Z0 139 aaKnown RBP9.71□□□□□ -0.86
PNKP-217ENST00000625216 IGLV11-55A0A075B6I3 123 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 IGHV4OR15-8A0A075B7B6 117 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 A0A087WW49 117 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 FNDC10F2Z333 226 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 IGHV3-11P01762 117 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 IGHV3-48P01763 117 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
PNKP-217ENST00000625216 SPP1P10451 314 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 ZP3P21754 424 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 FGF7P21781 194 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 OPRK1P41145 380 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 SLC25A24Q6NUK1 477 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 ZNF767PQ75MW2 155 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 PHYHIPLQ96FC7 376 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 USMG5Q96IX5 58 aa9.7□□□□□ -0.86
PNKP-217ENST00000625216 IGHV3-21A0A0B4J1V1 117 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 I3L2K1 104 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 K7EIM0 57 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 CORTO00230 105 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 SAP30O75446 220 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 MT-CO2P00403 227 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 IFNA7P01567 189 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 SLURP1P55000 103 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 AKR1C1Q04828 323 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 GAMTQ14353 236 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 KLK9Q2XQG4 91 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 ACSM6Q6P461 480 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 BTNL8Q6UX41 500 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 SCARB1Q8WTV0 552 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 SLC35E1Q96K37 410 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 MGST2Q99735 147 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 ELOVL1Q9BW60 279 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 SLC25A32Q9H2D1 315 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 UBQLN2Q9UHD9 624 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 KLK9Q9UKQ9 250 aa9.69□□□□□ -0.86
PNKP-217ENST00000625216 IGKV1OR2-108A0A075B7D4 117 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 RPS10-NUDT3A0A1W2PQS6 291 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 SEC11BP0C7V7 166 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 DEFA4P12838 97 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 GPX4P36969 197 aaPredicted RBP9.68□□□□□ -0.86
PNKP-217ENST00000625216 TMEM144Q7Z5S9 345 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 OR1L6Q8NGR2 347 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 SCGB1C1Q8TD33 95 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 PCNPQ8WW12 178 aaKnown RBP9.68□□□□□ -0.86
PNKP-217ENST00000625216 CACNG8Q8WXS5 425 aa9.68□□□□□ -0.86
PNKP-217ENST00000625216 PRR25Q96S07 402 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms